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The map label for this gene is yhdW [H]

Identifier: 82749936

GI number: 82749936

Start: 206667

End: 208430

Strand: Direct

Name: yhdW [H]

Synonym: SAB0167

Alternate gene names: 82749936

Gene position: 206667-208430 (Clockwise)

Preceding gene: 82749935

Following gene: 82749938

Centisome position: 7.54

GC content: 30.78

Gene sequence:

>1764_bases
ATGAAGAGAATTAGTAAAGATATATGGGCAGTATTTAAATTACTGTATCAAAATAAAGGGCGTTTTAGCATTAATGCCTT
ACTATTGCAGTTAATCATGATTTTTATTAGTAGTACATACTTAATTTTACTATTTAATATGATGTTAAAAGTAGCTGGGC
AAAGCCAACTTACGATTAACAATTGGACGGAAATCGTTAGTCATCCTGCCAGTGTGATACTTCTTATTATATTCATATTA
AGTGTTGCTTTTCTGATTTATGTAGAGTTTTCATTGTTAGTTTATATGGTTTATGCCGGCTTTGATCGACAGATTATTAC
ATTTAAATCCATTTTTAAAAATGCCTTTGTAAATGTGCGTAAACTCATAGGTGTACCAGTTATTTTCTTTGTCATTTATT
TAATGTTAATGATACCCATTGCCAACCTAGGACTAAGTTCAGTATTAACAAAAAATATTTACATACCTAAATTTTTAACG
GAAGAACTTATGAAAACGACGAAAGGTATAATCATTTACGGTACCTTTATGATTGCTGTATTTATATTAAACTTTAAATT
AATATTTACCTTACCGTTAACGATTTTAAACCGCCAGTCGTTATTTAAAAATATGAGACTAAGTTGGCAAATTACGAAGC
GAAATAAGTTTCGACTTGTTATAGAAATAGTTATATTAGAACTCATCATTGGTGCGATTTTAACATTAATTATTTCAGGA
GCAACATATCTTGCTATTTGTGTAGATGAAGAAGGAGATAAGTTTTTAGTCTCATCAATTTTATTTGTTGTATTGAAAAG
CTCATTGTTCTTCTATTATTTATTTACGAAATTATCATTAATCAGTGTGTTAGTACTGCACTTAAAACAAGAGAATGTAT
TAGACCAACCGGGCTTAGAATTTAAATACCCAAAACCGAAACGGAAGTCTAGGTTCTTTATAATTTCAATGGTGCTTGCA
GTGACATGTTTTATCGGTTATAACATGTACTTACTTTACAATAATACTATCAATACAAATATCTCCATTATTGGTCATCG
TGGTTTCGAAGATAAAGGCGTTGAAAATTCTATTCCGTCATTGAAAGCTGCTGCAAAAGCGAATGTCGAATACGTTGAGT
TAGATACAATTATGACGAAAGATAAACAATTTGTTGTTAGTCATGATAACGATTTGAAACGTTTAACAGGTGTTAATAAA
AATATTTCTGAATCTAATTTCAAAGATGTCGTCGGTTTGAAAATGCGTCAAAATGGACATGAAGCAAAACTTGTATCCTT
AGACGAATTTATTGAAACGGCTAAACAATCAAATGTGAAGCTACTAGTAGAGTTAAAGCCACATGGTAAAGAACAAGGAG
ATTATACACAACGTGTTATTGATATTTTGAAAAAGCATGGTGTTGAACATCAATATCGTGTGATGTCATTGGATTATGAT
GTGATGACTAAGTTGAAAAAAGAAGCGCCATATCTCAAGTGTGGTTATATCATACCGTTACAGTTTGGTCATTTTAAAGA
AACATCATTAGATTTCTTTGTCATCGAAGATTTTTCTTATTCGCCGAGACTTGTTAATCAAGCACACTTGGAAAATAAAG
AAGTCTATACTTGGACCATTAACGGAGAAGAAGATTTAACGAAATACTTACAAACCAATGTTGATGGTATTATCACAGAT
GACCCAGCATTAGCTGATCAGATTAAAGAAGAAAAGAAAGACGAAACATACTTCGATCGTTCTATAAGAATATTATTTGA
ATAA

Upstream 100 bases:

>100_bases
TACTTGCATATGAATATGAGTCTTTTCAAATTTTTATTGACCCTGAGTAATGAAAAATATTAAGATGAAACTTAATATTA
AAGCAATGCGGAGCGTGATT

Downstream 100 bases:

>100_bases
TAAAAACAAAGACCTCTAAAGTTATCAAGACGATACTTTCAGAGGTCTTTTTAACGTTGCCTTCTATGGGGATAGGCAAT
CGTTTCATTCGTTTATAATC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILLFNMMLKVAGQSQLTINNWTEIVSHPASVILLIIFIL
SVAFLIYVEFSLLVYMVYAGFDRQIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLT
EELMKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEIVILELIIGAILTLIISG
ATYLAICVDEEGDKFLVSSILFVVLKSSLFFYYLFTKLSLISVLVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLA
VTCFIGYNMYLLYNNTINTNISIIGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNDLKRLTGVNK
NISESNFKDVVGLKMRQNGHEAKLVSLDEFIETAKQSNVKLLVELKPHGKEQGDYTQRVIDILKKHGVEHQYRVMSLDYD
VMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPRLVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITD
DPALADQIKEEKKDETYFDRSIRILFE

Sequences:

>Translated_587_residues
MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILLFNMMLKVAGQSQLTINNWTEIVSHPASVILLIIFIL
SVAFLIYVEFSLLVYMVYAGFDRQIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLT
EELMKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEIVILELIIGAILTLIISG
ATYLAICVDEEGDKFLVSSILFVVLKSSLFFYYLFTKLSLISVLVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLA
VTCFIGYNMYLLYNNTINTNISIIGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNDLKRLTGVNK
NISESNFKDVVGLKMRQNGHEAKLVSLDEFIETAKQSNVKLLVELKPHGKEQGDYTQRVIDILKKHGVEHQYRVMSLDYD
VMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPRLVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITD
DPALADQIKEEKKDETYFDRSIRILFE
>Mature_587_residues
MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILLFNMMLKVAGQSQLTINNWTEIVSHPASVILLIIFIL
SVAFLIYVEFSLLVYMVYAGFDRQIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLT
EELMKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEIVILELIIGAILTLIISG
ATYLAICVDEEGDKFLVSSILFVVLKSSLFFYYLFTKLSLISVLVLHLKQENVLDQPGLEFKYPKPKRKSRFFIISMVLA
VTCFIGYNMYLLYNNTINTNISIIGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNDLKRLTGVNK
NISESNFKDVVGLKMRQNGHEAKLVSLDEFIETAKQSNVKLLVELKPHGKEQGDYTQRVIDILKKHGVEHQYRVMSLDYD
VMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPRLVNQAHLENKEVYTWTINGEEDLTKYLQTNVDGIITD
DPALADQIKEEKKDETYFDRSIRILFE

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG4781

COG function: function code C; Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Homo sapiens, GI260763876, Length=266, Percent_Identity=24.4360902255639, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI260763878, Length=155, Percent_Identity=29.0322580645161, Blast_Score=67, Evalue=6e-11,
Organism=Homo sapiens, GI260763880, Length=155, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 67704; Mature: 67704

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILLFNMMLKVAGQSQLTIN
CCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH
NWTEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFDRQIITFKSIFKNAFVNVR
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLTEELMKTTKGIIIYGTFMIAV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCEEEEHHHHHHH
FILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEIVILELIIGAILTLIISG
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
ATYLAICVDEEGDKFLVSSILFVVLKSSLFFYYLFTKLSLISVLVLHLKQENVLDQPGLE
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
FKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYNNTINTNISIIGHRGFEDKGVENSIPS
CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCEECCEEEEEEECCCCCCCCCCCCCC
LKAAAKANVEYVELDTIMTKDKQFVVSHDNDLKRLTGVNKNISESNFKDVVGLKMRQNGH
HHHHHHCCCEEEEEHHHHCCCCEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
EAKLVSLDEFIETAKQSNVKLLVELKPHGKEQGDYTQRVIDILKKHGVEHQYRVMSLDYD
CEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHH
VMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPRLVNQAHLENKEVYTWTI
HHHHHHHCCCCEEECEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEEE
NGEEDLTKYLQTNVDGIITDDPALADQIKEEKKDETYFDRSIRILFE
CCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCHHHCCEEEEEEC
>Mature Secondary Structure
MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILLFNMMLKVAGQSQLTIN
CCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH
NWTEIVSHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFDRQIITFKSIFKNAFVNVR
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLTEELMKTTKGIIIYGTFMIAV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCEEEEHHHHHHH
FILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEIVILELIIGAILTLIISG
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
ATYLAICVDEEGDKFLVSSILFVVLKSSLFFYYLFTKLSLISVLVLHLKQENVLDQPGLE
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
FKYPKPKRKSRFFIISMVLAVTCFIGYNMYLLYNNTINTNISIIGHRGFEDKGVENSIPS
CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCEECCEEEEEEECCCCCCCCCCCCCC
LKAAAKANVEYVELDTIMTKDKQFVVSHDNDLKRLTGVNKNISESNFKDVVGLKMRQNGH
HHHHHHCCCEEEEEHHHHCCCCEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
EAKLVSLDEFIETAKQSNVKLLVELKPHGKEQGDYTQRVIDILKKHGVEHQYRVMSLDYD
CEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHH
VMTKLKKEAPYLKCGYIIPLQFGHFKETSLDFFVIEDFSYSPRLVNQAHLENKEVYTWTI
HHHHHHHCCCCEEECEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEEE
NGEEDLTKYLQTNVDGIITDDPALADQIKEEKKDETYFDRSIRILFE
CCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]