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The map label for this gene is capN

Identifier: 82749875

GI number: 82749875

Start: 125678

End: 126565

Strand: Direct

Name: capN

Synonym: SAB0103

Alternate gene names: 82749875

Gene position: 125678-126565 (Clockwise)

Preceding gene: 82749874

Following gene: 82749876

Centisome position: 4.58

GC content: 33.11

Gene sequence:

>888_bases
ATGAGAAAAAATATTTTAATTACAGGCGTACATGGATATATCGGTAATATTTTAAAAGATAAGCTTATTGAACAAGGACA
TCAAGTGGATCAAATTAATGTTAGGAATCAATTATGGAAGTCGACCTCGTTCAAAGATTATGATGTTTTAATTCATACAG
CAGCTTTGGTTCACAACAATTCACCTCAAGCAAGGCTATCTGATTATATGCAAGTGAATATGTTGCTTACGAAACAACTG
GCACAAAAGGCTAAAGCTGAAGACGTTAAACAATTTATTTTTATGAGTACTATGGCAGTTTATGGAAAAGAAGGTCAGGT
TGGTAAATCAGATCAAATTGATACACAAACACCAATGAACCCTACGACCAATTATGGTATTTCCAAAAAGTTCGCTGAAC
AAGCATTACAAGAGTTGATTAGTGATTCGTTTAAAGTAGCAATTGTGAGACCACCAATGATTTATGGTGCACATTGCCCA
GGAAATTTCCAACGGTTAATGCAATTGTCAAAGCGATTGCTAATCATTCCAAATATTAACAATCAGCGCAGTGCATTATA
TATTAAACATCTGACAGCATTTATTGATCAATTAATATCATTAGAAGTTACAGGAGTGTATCATCCTCAAGATAGTTTTT
ACTTTGATACATCGTCAGTAATGTATGAAATACGTCGCCAATCACATCGTAAAACGGTATTGATCAACATGCCTTCAATG
CTAAATAAGTATTTTAATAAGTTGTCGGTATTTAGAAAATTATTCGGCAATTTAACATACAGCAATACGTTATATGAAAA
TAATAATGCACTTGAAGTTATTCCTGGAAAAATGTCACTTGTTATTGCGGACATCATGGATGAAACGACAACCAAAGATA
AGGCATAA

Upstream 100 bases:

>100_bases
ATGATCATTATTACTTAACACATCAATCTATGATGCTTGATATGTATATTATATATAAAACAATTAAAAATATCGTTACT
TCAGAAGGTGTGCATCACTA

Downstream 100 bases:

>100_bases
GTCATCTATTAAATAAAATCAACATACAAATTGTTTTATTTGGAGGTTATAGTATGAAGTTAACAGTAGTTGGCTTAGGT
TATATTGGTTTACCAACATC

Product: capsular polysaccharide synthesis enzyme CapN

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRKNILITGVHGYIGNILKDKLIEQGHQVDQINVRNQLWKSTSFKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQL
AQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCP
GNFQRLMQLSKRLLIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSM
LNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMSLVIADIMDETTTKDKA

Sequences:

>Translated_295_residues
MRKNILITGVHGYIGNILKDKLIEQGHQVDQINVRNQLWKSTSFKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQL
AQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCP
GNFQRLMQLSKRLLIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSM
LNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMSLVIADIMDETTTKDKA
>Mature_295_residues
MRKNILITGVHGYIGNILKDKLIEQGHQVDQINVRNQLWKSTSFKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQL
AQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCP
GNFQRLMQLSKRLLIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSM
LNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMSLVIADIMDETTTKDKA

Specific function: Galactose metabolism; third step. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 33721; Mature: 33721

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNILITGVHGYIGNILKDKLIEQGHQVDQINVRNQLWKSTSFKDYDVLIHTAALVHNN
CCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHCCC
SPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCPGNFQRLMQLSKRLLIIPNIN
CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCHHHHHHHHHCCCEEEEECCC
NQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSM
CCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECHHHHHHHHHHHCCCCEEEEECHHH
LNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMSLVIADIMDETTTKDKA
HHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKNILITGVHGYIGNILKDKLIEQGHQVDQINVRNQLWKSTSFKDYDVLIHTAALVHNN
CCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHCCC
SPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCPGNFQRLMQLSKRLLIIPNIN
CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCHHHHHHHHHCCCEEEEECCC
NQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSM
CCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECHHHHHHHHHHHCCCCEEEEECHHH
LNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMSLVIADIMDETTTKDKA
HHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820651; 10521656 [H]