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The map label for this gene is 82749816

Identifier: 82749816

GI number: 82749816

Start: 50209

End: 50979

Strand: Direct

Name: 82749816

Synonym: SAB0040

Alternate gene names: NA

Gene position: 50209-50979 (Clockwise)

Preceding gene: 82749815

Following gene: 82749817

Centisome position: 1.83

GC content: 29.05

Gene sequence:

>771_bases
ATGATAAAACGTGTAAATAAATTAGTGATTGGTATTAGTCTTCTGTTTTTAGTCATTAGTATTACTGCTGGTTGCGGCAT
GGGTAAAGAAGAGGAAATTAAGAAAAGTTTTGAAAAGACATTGAGTATGTATCCAATTAAAAATCTAGAGGATTTATACG
ATAAAAAAGGTTATCGTGATGATCAATTTGATAAAAATGATAAAGGAACGTGGATTGTTCGTTCGTCAATGTCGATTCAA
CCTAATGGAAAAGATATGAACGTAAAAGGCATGGTTTTATATATGATTAGAAATACAAGAACAACAAATGGTTATTACTA
TGTTGATGTTATAGAAAGAGAGGATAAAGGTATACATCGTGATAACGAAAAAAGGTATCCAGTAAAAATGGTCGATAATA
AAATCATTCCAACTAAAGAAATTGAAGATGAAAAAATAAAAAAAGAAATAGAAAACTTTAAGTTCTTTGTTCAATATGGC
AACTTTAAAGATTTGTCGAAGTACAAAGATGGAGACATTTCATATAATCCAGAAGCGCCGATTTATTCAGCTAAATATCA
ATTAACTAATAATGATTATAACGTAAAGCAATTACGAAAAAGATATAATATACCAACGAATAAAGCTCCAAAGTTATTGT
TGAAAGGTACAGGTAATTTAAAAGGCTCATCAGTTGGATATAAAGACATTGAATTTACTTTCGTGGAGAAAAAAGGTGAA
AATATATACTTTAGTGATAGTCTACATCTTGAACCGAGTGAGGATAAATAA

Upstream 100 bases:

>100_bases
TATTTATTTTAGTGATGGGTTAATTTTTAAACCAAGTGAGGATAAATAATCATGACTCGATCAAAATATGAAATCAATCC
AGGAAAAAGAGAGTGATGAA

Downstream 100 bases:

>100_bases
TCATCCACACACACGATTCAATATGAAATTCAAATATGTTGCTGTAAAATAAACGTATTCATATTACTGAATTGAGGGAT
AGTATGCAACGTGATTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MIKRVNKLVIGISLLFLVISITAGCGMGKEEEIKKSFEKTLSMYPIKNLEDLYDKKGYRDDQFDKNDKGTWIVRSSMSIQ
PNGKDMNVKGMVLYMIRNTRTTNGYYYVDVIEREDKGIHRDNEKRYPVKMVDNKIIPTKEIEDEKIKKEIENFKFFVQYG
NFKDLSKYKDGDISYNPEAPIYSAKYQLTNNDYNVKQLRKRYNIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKGE
NIYFSDSLHLEPSEDK

Sequences:

>Translated_256_residues
MIKRVNKLVIGISLLFLVISITAGCGMGKEEEIKKSFEKTLSMYPIKNLEDLYDKKGYRDDQFDKNDKGTWIVRSSMSIQ
PNGKDMNVKGMVLYMIRNTRTTNGYYYVDVIEREDKGIHRDNEKRYPVKMVDNKIIPTKEIEDEKIKKEIENFKFFVQYG
NFKDLSKYKDGDISYNPEAPIYSAKYQLTNNDYNVKQLRKRYNIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKGE
NIYFSDSLHLEPSEDK
>Mature_256_residues
MIKRVNKLVIGISLLFLVISITAGCGMGKEEEIKKSFEKTLSMYPIKNLEDLYDKKGYRDDQFDKNDKGTWIVRSSMSIQ
PNGKDMNVKGMVLYMIRNTRTTNGYYYVDVIEREDKGIHRDNEKRYPVKMVDNKIIPTKEIEDEKIKKEIENFKFFVQYG
NFKDLSKYKDGDISYNPEAPIYSAKYQLTNNDYNVKQLRKRYNIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKGE
NIYFSDSLHLEPSEDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the staphylococcal tandem lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y040_STAAB (Q2YUT0)

Other databases:

- EMBL:   AJ938182
- RefSeq:   YP_415557.1
- STRING:   Q2YUT0
- EnsemblBacteria:   EBSTAT00000011117
- GeneID:   3793768
- GenomeReviews:   AJ938182_GR
- KEGG:   sab:SAB0040
- NMPDR:   fig|273036.3.peg.169
- GeneTree:   EBGT00050000024034
- HOGENOM:   HBG693076
- OMA:   SSMSIQP
- ProtClustDB:   CLSK884392
- BioCyc:   SAUR273036:SAB0040-MONOMER
- InterPro:   IPR007595
- TIGRFAMs:   TIGR01742

Pfam domain/function: PF04507 DUF576

EC number: NA

Molecular weight: Translated: 29850; Mature: 29850

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRVNKLVIGISLLFLVISITAGCGMGKEEEIKKSFEKTLSMYPIKNLEDLYDKKGYRD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
DQFDKNDKGTWIVRSSMSIQPNGKDMNVKGMVLYMIRNTRTTNGYYYVDVIEREDKGIHR
CCCCCCCCCCEEEEECEEECCCCCCCCCCEEEEEEEECCEECCCEEEEEEEECCCCCCCC
DNEKRYPVKMVDNKIIPTKEIEDEKIKKEIENFKFFVQYGNFKDLSKYKDGDISYNPEAP
CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCEEEEEEECCCHHHHHCCCCCCCCCCCCC
IYSAKYQLTNNDYNVKQLRKRYNIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKGE
EEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCC
NIYFSDSLHLEPSEDK
EEEEECCEECCCCCCC
>Mature Secondary Structure
MIKRVNKLVIGISLLFLVISITAGCGMGKEEEIKKSFEKTLSMYPIKNLEDLYDKKGYRD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
DQFDKNDKGTWIVRSSMSIQPNGKDMNVKGMVLYMIRNTRTTNGYYYVDVIEREDKGIHR
CCCCCCCCCCEEEEECEEECCCCCCCCCCEEEEEEEECCEECCCEEEEEEEECCCCCCCC
DNEKRYPVKMVDNKIIPTKEIEDEKIKKEIENFKFFVQYGNFKDLSKYKDGDISYNPEAP
CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCEEEEEEECCCHHHHHCCCCCCCCCCCCC
IYSAKYQLTNNDYNVKQLRKRYNIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKGE
EEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCC
NIYFSDSLHLEPSEDK
EEEEECCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA