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The map label for this gene is ftsY [H]

Identifier: 82703851

GI number: 82703851

Start: 3143555

End: 3144541

Strand: Direct

Name: ftsY [H]

Synonym: Nmul_A2738

Alternate gene names: 82703851

Gene position: 3143555-3144541 (Clockwise)

Preceding gene: 82703845

Following gene: 82703852

Centisome position: 98.72

GC content: 57.95

Gene sequence:

>987_bases
ATGGCAAGTTTCTTCAAATCCAAAAATGATTCCACGACGAGCGAACCTCCGAATTCGAATTGGGGGGTGAGGGTTCGGCA
AGGCCTGTCCCGCACGCGTAACAACCTTGGCAAGCGCCTTTCGGGTCTCTTCGGTGGCGGAGCAATCGATGAAGATCTCT
ACGAGGAGATGGAAACCATATTGCTCACGGCGGATGCGGGTGTCAGTGCCACCACCTGGCTGCTGGAGGAGTTGCGCAGA
AAAGTCAAACGTAACGGCTTGACCGATGCGTCGCAGCTCAAAGAGGCGTTGCAGGAGGCGCTGGTCGACCTGCTGGAACC
GCTTGCGCAACCCCTCGATACCAGCGCCCACCACCCTTTCATCATCATGCTGACCGGGGTGAACGGTGCCGGAAAAACCA
CTTCCATTGGAAAACTTGCGCATTATTATCAACTGCAGGGCAAGTCCGTGCTGCTCGCCGCGGGCGATACCTTCCGTGCC
GCAGCGCGCGAGCAGCTGATGGCGTGGGGGGAGCGCAACCGCGTCGCGGTGATCGCGCAGGAAAGCAGCGATCAACAAAG
AGGTGATCCGGCGGCGGTCATATTCGATGCCGTCAACGCGGCGAAAGCGCGGGGCATCGATATCGTGCTGGCGGACACTG
CCGGAAGGCTGGCCACGCAACTCCACCTCATGGAGGAAATAAAAAAGGTGAAGCGCGTTATTGCCAAAACCGAGCCCGGG
GCGCCTCATGAAACGTTACTGGTTCTGGATGCGAATACCGGGCAGAATGCAGTCAATCAGGTACAGGCATTCGACGATGC
CCTTGGCCTGACAGGTCTCATTGTCACCAAGCTGGATGGAACCGCAAAAGGAGGCGTGCTTGCCGCCATCGCCCGCCAAC
GCCAGCAAAAAGTCCCGTTGCCTGTCCGGTTTATCGGTGTAGGTGAGGGTCTGGACGATTTGAGGCCTTTCGTCGCACGC
GAATTTGTCGGAGCGTTGTTTGATTGA

Upstream 100 bases:

>100_bases
CTTTTTTAATTAATACCTGAATCCGGATAAACAGAATAAAATCCAGAATAAGATTGCGTGAGGTTTACTTCGAGGTCTCA
AATACTGACAGCCTACCAGA

Downstream 100 bases:

>100_bases
GTTGATTGAGGGAAATATACGAAAAGGATGGAGTTGAGATGGAGTTGACCCGGCCAGCTCGCCGTACCAATAGATGATCA
GCTTCAGTGAGGTTTCCAAG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MASFFKSKNDSTTSEPPNSNWGVRVRQGLSRTRNNLGKRLSGLFGGGAIDEDLYEEMETILLTADAGVSATTWLLEELRR
KVKRNGLTDASQLKEALQEALVDLLEPLAQPLDTSAHHPFIIMLTGVNGAGKTTSIGKLAHYYQLQGKSVLLAAGDTFRA
AAREQLMAWGERNRVAVIAQESSDQQRGDPAAVIFDAVNAAKARGIDIVLADTAGRLATQLHLMEEIKKVKRVIAKTEPG
APHETLLVLDANTGQNAVNQVQAFDDALGLTGLIVTKLDGTAKGGVLAAIARQRQQKVPLPVRFIGVGEGLDDLRPFVAR
EFVGALFD

Sequences:

>Translated_328_residues
MASFFKSKNDSTTSEPPNSNWGVRVRQGLSRTRNNLGKRLSGLFGGGAIDEDLYEEMETILLTADAGVSATTWLLEELRR
KVKRNGLTDASQLKEALQEALVDLLEPLAQPLDTSAHHPFIIMLTGVNGAGKTTSIGKLAHYYQLQGKSVLLAAGDTFRA
AAREQLMAWGERNRVAVIAQESSDQQRGDPAAVIFDAVNAAKARGIDIVLADTAGRLATQLHLMEEIKKVKRVIAKTEPG
APHETLLVLDANTGQNAVNQVQAFDDALGLTGLIVTKLDGTAKGGVLAAIARQRQQKVPLPVRFIGVGEGLDDLRPFVAR
EFVGALFD
>Mature_327_residues
ASFFKSKNDSTTSEPPNSNWGVRVRQGLSRTRNNLGKRLSGLFGGGAIDEDLYEEMETILLTADAGVSATTWLLEELRRK
VKRNGLTDASQLKEALQEALVDLLEPLAQPLDTSAHHPFIIMLTGVNGAGKTTSIGKLAHYYQLQGKSVLLAAGDTFRAA
AREQLMAWGERNRVAVIAQESSDQQRGDPAAVIFDAVNAAKARGIDIVLADTAGRLATQLHLMEEIKKVKRVIAKTEPGA
PHETLLVLDANTGQNAVNQVQAFDDALGLTGLIVTKLDGTAKGGVLAAIARQRQQKVPLPVRFIGVGEGLDDLRPFVARE
FVGALFD

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=284, Percent_Identity=32.7464788732394, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI226371618, Length=244, Percent_Identity=33.6065573770492, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI23308697, Length=338, Percent_Identity=31.0650887573964, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI295424842, Length=338, Percent_Identity=31.0650887573964, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI89061728, Length=140, Percent_Identity=35.7142857142857, Blast_Score=86, Evalue=6e-17,
Organism=Escherichia coli, GI1789874, Length=312, Percent_Identity=50.9615384615385, Blast_Score=298, Evalue=3e-82,
Organism=Escherichia coli, GI1788963, Length=293, Percent_Identity=33.4470989761092, Blast_Score=141, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI17539958, Length=303, Percent_Identity=29.042904290429, Blast_Score=131, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=265, Percent_Identity=32.8301886792453, Blast_Score=101, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6325345, Length=282, Percent_Identity=32.6241134751773, Blast_Score=135, Evalue=8e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=334, Percent_Identity=25.4491017964072, Blast_Score=85, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17647949, Length=280, Percent_Identity=31.4285714285714, Blast_Score=141, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24641198, Length=265, Percent_Identity=31.3207547169811, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 35315; Mature: 35184

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFFKSKNDSTTSEPPNSNWGVRVRQGLSRTRNNLGKRLSGLFGGGAIDEDLYEEMETI
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHE
LLTADAGVSATTWLLEELRRKVKRNGLTDASQLKEALQEALVDLLEPLAQPLDTSAHHPF
EEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
IIMLTGVNGAGKTTSIGKLAHYYQLQGKSVLLAAGDTFRAAAREQLMAWGERNRVAVIAQ
EEEEECCCCCCCCCHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEE
ESSDQQRGDPAAVIFDAVNAAKARGIDIVLADTAGRLATQLHLMEEIKKVKRVIAKTEPG
CCCCCCCCCCCEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
APHETLLVLDANTGQNAVNQVQAFDDALGLTGLIVTKLDGTAKGGVLAAIARQRQQKVPL
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCC
PVRFIGVGEGLDDLRPFVAREFVGALFD
CEEEEECCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASFFKSKNDSTTSEPPNSNWGVRVRQGLSRTRNNLGKRLSGLFGGGAIDEDLYEEMETI
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHE
LLTADAGVSATTWLLEELRRKVKRNGLTDASQLKEALQEALVDLLEPLAQPLDTSAHHPF
EEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
IIMLTGVNGAGKTTSIGKLAHYYQLQGKSVLLAAGDTFRAAAREQLMAWGERNRVAVIAQ
EEEEECCCCCCCCCHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEE
ESSDQQRGDPAAVIFDAVNAAKARGIDIVLADTAGRLATQLHLMEEIKKVKRVIAKTEPG
CCCCCCCCCCCEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
APHETLLVLDANTGQNAVNQVQAFDDALGLTGLIVTKLDGTAKGGVLAAIARQRQQKVPL
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCC
PVRFIGVGEGLDDLRPFVAREFVGALFD
CEEEEECCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]