| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
Click here to switch to the map view.
The map label for this gene is ytnM [H]
Identifier: 82703794
GI number: 82703794
Start: 3080864
End: 3081841
Strand: Direct
Name: ytnM [H]
Synonym: Nmul_A2681
Alternate gene names: 82703794
Gene position: 3080864-3081841 (Clockwise)
Preceding gene: 82703791
Following gene: 82703799
Centisome position: 96.75
GC content: 56.54
Gene sequence:
>978_bases ATGAAGATTCGCAACCTGGATCTGTCAGGCAACCCGATCAATATCGAACATCAGCAATTGGGAATTCCTCCCGTCGAGGA ACCTGTCTCCCATCCCGGCACTCACCCGCTCCTTCACGCGGCGGCCTGGTTCGCCGTGGCAGTGTTGATCTTATTGATCC TTTTTCTGGCCGCTCGTTTTTTTATTTCCAATAACTGGTTCGGGGGCTGGCAGATCATTGGCGAGACCTTGAGCAGCAGC ATTTTCTGGAATGCTGCAATAGTCGGGTTCTTCGCCCAGGTCGTGGATGGCGCTCTGGGAATGGCTTATGGGGTGACAGC TACTACCTTTCTGCTTGCTTCGGGCGCCACACCCGGGGTTGCCAGCGCGAGCGTCCATATCGCCGAGATTTTTACCACCG GCGTTTCCGGCATTTCGCATGTCAAGTTCGGCAACGTGAACAAGGATTTGTTCGTCCGGTTGCTCGTGCCCGGCATCCTT GGCAGTATCCTGGGGGCGGTGCTGGTGACGCAGGTCGATGGCGCCCTGTTCAAGCCCTATGTTTCCGTGTATCTGTTGCT GCTGGGAATCTACATACTGAGCAAAGCGTTCCGGTCTTTGCGTCTGCGCAAGAATCCGCCGAAGCATGTCGGAAAGCTCG CCCTGTTTGGCGGATTCGTCGATGCGGCAGGCGGGGGGGGATGGGGACCGGTGGTAACCTCCACGCTGGTCAGTACGGGA AACGATCCCCGCACGACCATAGGCTCCGTCAATTTCGCCGAATTCTTCCTGACCCTGACCGGCGCCGCAGTTTTCACCTT GCTGATGGAAACCAATACGTGGCCCATCATCGCGGGATTGGTCTTCGGTGGTTTGTTCGCCGCGCCGTTTGCGGCAGTTC TATGCAAAAAACTGCACGCGAAGACCCTGCTCATACTGGTGGGTTCCCTGATCATGATAACCAGTCTTTATAACGTATAC AGGGCGCTCGGGGGCTAG
Upstream 100 bases:
>100_bases CCCGAAATAACAAAAGAATAAACATATTCTATTAGGTTATTTCTGGATATTCATGCCTGTCGGTATAGTGTTGCGCTTAT AGAAGAGACAGGAATAAGGT
Downstream 100 bases:
>100_bases GGCAGAAGCTGGGAAATATAATCGAAATGCAATCTTCCACGCCTGCGGGGGATTTTTTCAGCGGTTTCCTAGAGTAAAGG CCCGATCATGGATTCGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKIRNLDLSGNPINIEHQQLGIPPVEEPVSHPGTHPLLHAAAWFAVAVLILLILFLAARFFISNNWFGGWQIIGETLSSS IFWNAAIVGFFAQVVDGALGMAYGVTATTFLLASGATPGVASASVHIAEIFTTGVSGISHVKFGNVNKDLFVRLLVPGIL GSILGAVLVTQVDGALFKPYVSVYLLLLGIYILSKAFRSLRLRKNPPKHVGKLALFGGFVDAAGGGGWGPVVTSTLVSTG NDPRTTIGSVNFAEFFLTLTGAAVFTLLMETNTWPIIAGLVFGGLFAAPFAAVLCKKLHAKTLLILVGSLIMITSLYNVY RALGG
Sequences:
>Translated_325_residues MKIRNLDLSGNPINIEHQQLGIPPVEEPVSHPGTHPLLHAAAWFAVAVLILLILFLAARFFISNNWFGGWQIIGETLSSS IFWNAAIVGFFAQVVDGALGMAYGVTATTFLLASGATPGVASASVHIAEIFTTGVSGISHVKFGNVNKDLFVRLLVPGIL GSILGAVLVTQVDGALFKPYVSVYLLLLGIYILSKAFRSLRLRKNPPKHVGKLALFGGFVDAAGGGGWGPVVTSTLVSTG NDPRTTIGSVNFAEFFLTLTGAAVFTLLMETNTWPIIAGLVFGGLFAAPFAAVLCKKLHAKTLLILVGSLIMITSLYNVY RALGG >Mature_325_residues MKIRNLDLSGNPINIEHQQLGIPPVEEPVSHPGTHPLLHAAAWFAVAVLILLILFLAARFFISNNWFGGWQIIGETLSSS IFWNAAIVGFFAQVVDGALGMAYGVTATTFLLASGATPGVASASVHIAEIFTTGVSGISHVKFGNVNKDLFVRLLVPGIL GSILGAVLVTQVDGALFKPYVSVYLLLLGIYILSKAFRSLRLRKNPPKHVGKLALFGGFVDAAGGGGWGPVVTSTLVSTG NDPRTTIGSVNFAEFFLTLTGAAVFTLLMETNTWPIIAGLVFGGLFAAPFAAVLCKKLHAKTLLILVGSLIMITSLYNVY RALGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 34333; Mature: 34333
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRNLDLSGNPINIEHQQLGIPPVEEPVSHPGTHPLLHAAAWFAVAVLILLILFLAARF CCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FISNNWFGGWQIIGETLSSSIFWNAAIVGFFAQVVDGALGMAYGVTATTFLLASGATPGV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ASASVHIAEIFTTGVSGISHVKFGNVNKDLFVRLLVPGILGSILGAVLVTQVDGALFKPY CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VSVYLLLLGIYILSKAFRSLRLRKNPPKHVGKLALFGGFVDAAGGGGWGPVVTSTLVSTG HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC NDPRTTIGSVNFAEFFLTLTGAAVFTLLMETNTWPIIAGLVFGGLFAAPFAAVLCKKLHA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KTLLILVGSLIMITSLYNVYRALGG HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIRNLDLSGNPINIEHQQLGIPPVEEPVSHPGTHPLLHAAAWFAVAVLILLILFLAARF CCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FISNNWFGGWQIIGETLSSSIFWNAAIVGFFAQVVDGALGMAYGVTATTFLLASGATPGV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ASASVHIAEIFTTGVSGISHVKFGNVNKDLFVRLLVPGILGSILGAVLVTQVDGALFKPY CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VSVYLLLLGIYILSKAFRSLRLRKNPPKHVGKLALFGGFVDAAGGGGWGPVVTSTLVSTG HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC NDPRTTIGSVNFAEFFLTLTGAAVFTLLMETNTWPIIAGLVFGGLFAAPFAAVLCKKLHA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KTLLILVGSLIMITSLYNVYRALGG HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]