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The map label for this gene is yfgC [C]

Identifier: 82703652

GI number: 82703652

Start: 2904338

End: 2905846

Strand: Direct

Name: yfgC [C]

Synonym: Nmul_A2537

Alternate gene names: 82703652

Gene position: 2904338-2905846 (Clockwise)

Preceding gene: 82703651

Following gene: 82703653

Centisome position: 91.21

GC content: 56.2

Gene sequence:

>1509_bases
ATGAAATTGCGCCACATATTGCTTTTTTTGCCGGCACTATTCACGGCGAATGCCCATGCCGAAGGCCTGCCGGACCTGGG
CGATGTATCTCAAGCAACCATATCTCCAAGAGAAGAGCGGGAGCTTGGGCTGAAAATAATGTCCGAGATCCGTTCGGACC
CCAGCTACCTGAACGACGCGGAAATTGACGCCTACCTCACCCGTCTCGGCAGTCGTCTGATTTCAGGTTCCACTGAGGCG
CGCCCCGAACAGGAGTTCGAGTTTTTTGCCCTCCAGGACCCGGCTCTCAATGCATTTGCATTACCGGGAGGTTTCATGGG
ATTCAATAGCGGCCTGATTCTCGCGGCGCAGTCGGAATCCGAATTGGCAGGAGTGATGGCACACGAAATCGCGCATGTCA
CGCAGAAGCATCTCGCGCGCATGATCGCCGGGCAAAAGTACAGCATGCTGACTTCCCTCGCCTCGATGGCGGTAGCTATC
CTGGCTTCTCGCGCCAATCCCCAGGCGGGGCAGGCTATTCTCGTGGCCTCGCAGGCAGGGCAGATTCAGAAACAATTGAA
CTTCACCCGAGAGCATGAAAAAGAGGCGGATAGAATCGGCCTCGGTATATTGACCGGGGCGGGACTTGATCCACGGGGTA
TGGCCGATTTTTTCGAGCGCATGCAGAGAGCAACCCGCTTTCTTGAAAACGGCGCCCCTTCATATCTGCGCACTCATCCC
GTTACATTCGAACGCATCGCTGATATCGAAGGCCGCACGCAGAGCTTGCCCTACCGACAGGTACCGGACAGTCTGGATTT
CCAGTTGGTGAGGGCCAAATTACGGGCCTCCATAGAGAAACCCGCCGATGCCGTTAACTATTTCGAATCGATTCTGCGTG
AAAAACGATACACCAATGAGACGGTGGAACGGTATGGACTCGTAACAGCCCTGCTGCGGAGCAGAGAGTACCAACGCGCA
GACAAGGAACTGCTGCGCCTGTATGACAGCCTGCAGCCCGAGGGCGCAGGGACCCTCCAGAATCATCGACTCGGAGCTTC
CATTCGGATTCAGCGCAGCATGCCCCCCTCCAGTCCCATGGTGGAAACCCTGGCGGCCCGTGTCAAACTCGCCGCCGGGC
AGACCGCCGAAGCCTTGGATATCTATCAAGCCGCGCTAGCGATATTCCCGCAGCACCGCGCGTTAATCTACGATTACATC
GAGGCGCTTCTGAGCAAAGTCAGTGCGCAGGATGCGCTCGACTTCATCAACCGGCAATTACAGTTCGACCCGAATGACGT
GCGCCTCTATAGATTGCAGGCGCAAAGCCATGAAGCCCTGGGAAACGCTCTGTTGCAACATCAGGCGCTGGCCGAAGTGT
ATTCCCGCCAGGGTAATTACCCTGCAGCAATCGAGCAGTTGCAGATCGCGCTTAAAACAGATGAGGGCGACTTCTACCAG
ATGTCGAGCGTGGAAGCACGTCTCCGGGAATTGCGGGAACTGGCTGCCAACGAATCCAAAAAAAAATAG

Upstream 100 bases:

>100_bases
CCTGATTCCTGCCCGCCTAATCCCGCTCCTTCCATTGCCTTCCGGTATACCTCGCCCTTGTCACGTGGAACTTCACGCGG
GAAGCGGTATCTTATCGACC

Downstream 100 bases:

>100_bases
AGTTTGTCAGATTCGATTCTACCGGCTGAATAATAGATATCCGCCCTTGCCTACCGCTGCCTTCCTTTGGGGAGGCTCTG
GCGGTCTGGGGAGCGCGCTC

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MKLRHILLFLPALFTANAHAEGLPDLGDVSQATISPREERELGLKIMSEIRSDPSYLNDAEIDAYLTRLGSRLISGSTEA
RPEQEFEFFALQDPALNAFALPGGFMGFNSGLILAAQSESELAGVMAHEIAHVTQKHLARMIAGQKYSMLTSLASMAVAI
LASRANPQAGQAILVASQAGQIQKQLNFTREHEKEADRIGLGILTGAGLDPRGMADFFERMQRATRFLENGAPSYLRTHP
VTFERIADIEGRTQSLPYRQVPDSLDFQLVRAKLRASIEKPADAVNYFESILREKRYTNETVERYGLVTALLRSREYQRA
DKELLRLYDSLQPEGAGTLQNHRLGASIRIQRSMPPSSPMVETLAARVKLAAGQTAEALDIYQAALAIFPQHRALIYDYI
EALLSKVSAQDALDFINRQLQFDPNDVRLYRLQAQSHEALGNALLQHQALAEVYSRQGNYPAAIEQLQIALKTDEGDFYQ
MSSVEARLRELRELAANESKKK

Sequences:

>Translated_502_residues
MKLRHILLFLPALFTANAHAEGLPDLGDVSQATISPREERELGLKIMSEIRSDPSYLNDAEIDAYLTRLGSRLISGSTEA
RPEQEFEFFALQDPALNAFALPGGFMGFNSGLILAAQSESELAGVMAHEIAHVTQKHLARMIAGQKYSMLTSLASMAVAI
LASRANPQAGQAILVASQAGQIQKQLNFTREHEKEADRIGLGILTGAGLDPRGMADFFERMQRATRFLENGAPSYLRTHP
VTFERIADIEGRTQSLPYRQVPDSLDFQLVRAKLRASIEKPADAVNYFESILREKRYTNETVERYGLVTALLRSREYQRA
DKELLRLYDSLQPEGAGTLQNHRLGASIRIQRSMPPSSPMVETLAARVKLAAGQTAEALDIYQAALAIFPQHRALIYDYI
EALLSKVSAQDALDFINRQLQFDPNDVRLYRLQAQSHEALGNALLQHQALAEVYSRQGNYPAAIEQLQIALKTDEGDFYQ
MSSVEARLRELRELAANESKKK
>Mature_502_residues
MKLRHILLFLPALFTANAHAEGLPDLGDVSQATISPREERELGLKIMSEIRSDPSYLNDAEIDAYLTRLGSRLISGSTEA
RPEQEFEFFALQDPALNAFALPGGFMGFNSGLILAAQSESELAGVMAHEIAHVTQKHLARMIAGQKYSMLTSLASMAVAI
LASRANPQAGQAILVASQAGQIQKQLNFTREHEKEADRIGLGILTGAGLDPRGMADFFERMQRATRFLENGAPSYLRTHP
VTFERIADIEGRTQSLPYRQVPDSLDFQLVRAKLRASIEKPADAVNYFESILREKRYTNETVERYGLVTALLRSREYQRA
DKELLRLYDSLQPEGAGTLQNHRLGASIRIQRSMPPSSPMVETLAARVKLAAGQTAEALDIYQAALAIFPQHRALIYDYI
EALLSKVSAQDALDFINRQLQFDPNDVRLYRLQAQSHEALGNALLQHQALAEVYSRQGNYPAAIEQLQIALKTDEGDFYQ
MSSVEARLRELRELAANESKKK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=480, Percent_Identity=30, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 55913; Mature: 55913

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRHILLFLPALFTANAHAEGLPDLGDVSQATISPREERELGLKIMSEIRSDPSYLNDA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCH
EIDAYLTRLGSRLISGSTEARPEQEFEFFALQDPALNAFALPGGFMGFNSGLILAAQSES
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCEEEEECCCH
ELAGVMAHEIAHVTQKHLARMIAGQKYSMLTSLASMAVAILASRANPQAGQAILVASQAG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHH
QIQKQLNFTREHEKEADRIGLGILTGAGLDPRGMADFFERMQRATRFLENGAPSYLRTHP
HHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCC
VTFERIADIEGRTQSLPYRQVPDSLDFQLVRAKLRASIEKPADAVNYFESILREKRYTNE
CHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHH
TVERYGLVTALLRSREYQRADKELLRLYDSLQPEGAGTLQNHRLGASIRIQRSMPPSSPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHH
VETLAARVKLAAGQTAEALDIYQAALAIFPQHRALIYDYIEALLSKVSAQDALDFINRQL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QFDPNDVRLYRLQAQSHEALGNALLQHQALAEVYSRQGNYPAAIEQLQIALKTDEGDFYQ
CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCH
MSSVEARLRELRELAANESKKK
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLRHILLFLPALFTANAHAEGLPDLGDVSQATISPREERELGLKIMSEIRSDPSYLNDA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCH
EIDAYLTRLGSRLISGSTEARPEQEFEFFALQDPALNAFALPGGFMGFNSGLILAAQSES
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCEEEEECCCH
ELAGVMAHEIAHVTQKHLARMIAGQKYSMLTSLASMAVAILASRANPQAGQAILVASQAG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHH
QIQKQLNFTREHEKEADRIGLGILTGAGLDPRGMADFFERMQRATRFLENGAPSYLRTHP
HHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCC
VTFERIADIEGRTQSLPYRQVPDSLDFQLVRAKLRASIEKPADAVNYFESILREKRYTNE
CHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHH
TVERYGLVTALLRSREYQRADKELLRLYDSLQPEGAGTLQNHRLGASIRIQRSMPPSSPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHH
VETLAARVKLAAGQTAEALDIYQAALAIFPQHRALIYDYIEALLSKVSAQDALDFINRQL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QFDPNDVRLYRLQAQSHEALGNALLQHQALAEVYSRQGNYPAAIEQLQIALKTDEGDFYQ
CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCH
MSSVEARLRELRELAANESKKK
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]