| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is wxcX [H]
Identifier: 82703518
GI number: 82703518
Start: 2739236
End: 2741722
Strand: Direct
Name: wxcX [H]
Synonym: Nmul_A2403
Alternate gene names: 82703518
Gene position: 2739236-2741722 (Clockwise)
Preceding gene: 82703517
Following gene: 82703519
Centisome position: 86.02
GC content: 48.17
Gene sequence:
>2487_bases ATGAAGGAATTACCGTCCAATAGCGTACAAAAAGGTAATCTATTGCGCTTAGCTCGCCGTTTAAGTTTTAAATTTCACCT CGCCCGGCAAAATCTAATTGCTCTCGTAAGTGATTCCCCTCCACGCGAAGACCTGTTTGATGGAGATTTCTACCTGGCGC AGTACTCGGACGTGGCCCAGGCTGGCATTGATCCATATGAACATTTTATCCTTTACGGTAGAAAGGAGGGTCGCATCGGT GTACCCGCGTATCTTCCGAAACTGGAGTACCGGGGTAACTTGGAAGCTATTAATCATGACCGCGATACCATACTGGTTGT CAGCCATGAGGCTTCGCGCACGGGCGCCCCTATATTAAGTCTGAACATCGTTCGCGAACTCAAAAAAAAGTACAACGTTA TAACCCTGTTGCTACTGAACGGCGGAGTGATTGCCGATGATTTCCTTCGCGCCTCCGACATCGTAATAGGACCATTCAGT GATGGACGTAACCCGGATTTGGTCGCTTCTGGAATTGATCAGTTACTAGCCTTGACTCCCGTAACGTTTGCAATTGTCAA TAGCATCGAATCCCGAGCGGTGCTTCCCGGGTTAGCAAGACGGTTTATTCCAACAGTCTCCCTTATCCACGAATTTGCCT CCTACGTAAGACCCGTAGGGAGTTTTCGTGAAGTTGTTTTCTGGTCTTCGGAAACCATATTTTCTGCTTCCTTGACATAT GAAAATGCCATTTCTGAATATCCAGATCTCCGGAATTGCAAATTTCCTGTAGTTCCCCAAGGACGCTGCGCCCTTCCTTC TCCAGAGAACGAAGCGGCTCTTCGGCTGGAGGAAGAAGCCAAGGTTCTCGCCATGCTTCGGCCGGTAGACTTGCCGAAAG ATACAGTCATTATTCTAGGTGCGGGGACTGTAGAGATTAGAAAAGGTGTGGATCTGTTTATTGCATGCGCTGCGGAGATA TTCAAGGCGTGTCCGGATGCGCTTTGCCGATTTGTCTGGATCGGTAGTGGTTATGATCCAGAGCATGACGGTGCGTACTC TGTCTATCTGGCGGACCAGATCCGCCGGTCGGGACTTCAGGAGCGCGTTTTTTTCCTGCCAGCAACTTCCAGTATTGAAA CAGCTTATCAAGCAGCAGATATTTTTTTACTGAGCCCCCGTCTGGATCCCTTGCCTAATGTAGCGATTGATGCCATGTGG CATGGATTGCCCGTCGTTTGTTTTGCGCGCGCCACTGGCATTGCGGACATCCTAATTGAAAATGGTTTTGAAAAAATATG TGTTGCACGCTATTTTGAAATATCTCAACTGGCATCCAAGATTCTGGCATTGATAAAGTCCAGGCCCATGAGACAGGAGA TTGGCAGGAAACTACAGCAATTAGTACTTAATAAATTCAACATCGAGCATTATGTAAGCCAATTGGAAGGGATTGGCTTT AATGCAGGTAAACGGGTTGTCAACGAACAGGCTGACATCCTGGAAATCATCAAGTCGGGGATTTCCCGCCTTGACTTCTA TGTTCCTCCATGGCTTGAAGGTCAACAGTTGGATGAAGCAGTAAGATTTTACGTACGGGCATGGCGGAGCGGGGTTTTGC GGAGGAAGCTATTTCCCGGCTTTCACCCGGGAGTTTTTCTTGAGCATAATGCAGGAAAATCTGAAGGAGATCCGTTAGCA AATTATTTGCGCGCCGGCCAACCGGACGGTCCTTGGCGGTATGGTCTTATAACGTCTGAAGAAGCCGCTCGCCCCCTATC TTCCTCCATCCGCGTAGCCCTCCATTTACATGTCTATTATTCGGAGCTATTTCCGGAAATAATGGCCCGACTAAAAGTAA ATAATGTTCGTCCTGATCTCTTTATCAGCGTGCCGACAGAATGCACGCGCAATGAGGTGACTGGTTTATTGAACGATTAT CCGGGAAAGGTCGTCGACATTCAGATAGTCCCCAACCGCGGACGCGATATCGGTCCTTTACTGACCGCCTTCGGCAGCGT ATTTCTTGATGATTATGATGCCATCGGACATTTACATACCAAAAAAACAGCCGATTTAAGTGATGAAATGATCGGCAAGA GGTGGTATACCTTCCTTCTGGAGAACTTACTGGGCGGCAAAAGAAACATGGCCGATATCATACTAGGACGCATGACTGCT GATCCTGCTATCGGCATAGTTTTCCCGGATGATCCACATGTTTTTGATTGGGGAAACAACAAGGCTCACGCAGACAGCCT TGCCAGCAAGCTGGGCTTGGGAAAGCTGCAGGAAAACTTTGTCTTCCCTATGGGGACAATGTTTTGGGCCCGGACCGAGG CACTTCGTCCACTTTTTACCCTGGACCTGAGCTGGCAAGATTACCCTGCCGAACCGCTCCCATACGACGGAACAATCTTG CACGCTCTTGAAAGATTGCTTCCATTGATAGCAGCAAAGCAATCAACTCGTTCTGTATTAACTAACGTAACAGGCGTAAC GAGATAA
Upstream 100 bases:
>100_bases AATTGCCACTCCTCTTGAAATCTGGAGACTTTTAGACAAGCGTTTACTTTTTAAAAAGAAGATCTAAGGCAATAAGGTTG CTCATTTCATACGAGGTGCC
Downstream 100 bases:
>100_bases CGTGAAAATAGTGATCTTTGGCGGCGGCGGTTTCATCGGCTCTGCAATCGTTGACAGACTGCTTCTCGATGGCCATGAAT TGACGATCTTCGAGCGGCCG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 828; Mature: 828
Protein sequence:
>828_residues MKELPSNSVQKGNLLRLARRLSFKFHLARQNLIALVSDSPPREDLFDGDFYLAQYSDVAQAGIDPYEHFILYGRKEGRIG VPAYLPKLEYRGNLEAINHDRDTILVVSHEASRTGAPILSLNIVRELKKKYNVITLLLLNGGVIADDFLRASDIVIGPFS DGRNPDLVASGIDQLLALTPVTFAIVNSIESRAVLPGLARRFIPTVSLIHEFASYVRPVGSFREVVFWSSETIFSASLTY ENAISEYPDLRNCKFPVVPQGRCALPSPENEAALRLEEEAKVLAMLRPVDLPKDTVIILGAGTVEIRKGVDLFIACAAEI FKACPDALCRFVWIGSGYDPEHDGAYSVYLADQIRRSGLQERVFFLPATSSIETAYQAADIFLLSPRLDPLPNVAIDAMW HGLPVVCFARATGIADILIENGFEKICVARYFEISQLASKILALIKSRPMRQEIGRKLQQLVLNKFNIEHYVSQLEGIGF NAGKRVVNEQADILEIIKSGISRLDFYVPPWLEGQQLDEAVRFYVRAWRSGVLRRKLFPGFHPGVFLEHNAGKSEGDPLA NYLRAGQPDGPWRYGLITSEEAARPLSSSIRVALHLHVYYSELFPEIMARLKVNNVRPDLFISVPTECTRNEVTGLLNDY PGKVVDIQIVPNRGRDIGPLLTAFGSVFLDDYDAIGHLHTKKTADLSDEMIGKRWYTFLLENLLGGKRNMADIILGRMTA DPAIGIVFPDDPHVFDWGNNKAHADSLASKLGLGKLQENFVFPMGTMFWARTEALRPLFTLDLSWQDYPAEPLPYDGTIL HALERLLPLIAAKQSTRSVLTNVTGVTR
Sequences:
>Translated_828_residues MKELPSNSVQKGNLLRLARRLSFKFHLARQNLIALVSDSPPREDLFDGDFYLAQYSDVAQAGIDPYEHFILYGRKEGRIG VPAYLPKLEYRGNLEAINHDRDTILVVSHEASRTGAPILSLNIVRELKKKYNVITLLLLNGGVIADDFLRASDIVIGPFS DGRNPDLVASGIDQLLALTPVTFAIVNSIESRAVLPGLARRFIPTVSLIHEFASYVRPVGSFREVVFWSSETIFSASLTY ENAISEYPDLRNCKFPVVPQGRCALPSPENEAALRLEEEAKVLAMLRPVDLPKDTVIILGAGTVEIRKGVDLFIACAAEI FKACPDALCRFVWIGSGYDPEHDGAYSVYLADQIRRSGLQERVFFLPATSSIETAYQAADIFLLSPRLDPLPNVAIDAMW HGLPVVCFARATGIADILIENGFEKICVARYFEISQLASKILALIKSRPMRQEIGRKLQQLVLNKFNIEHYVSQLEGIGF NAGKRVVNEQADILEIIKSGISRLDFYVPPWLEGQQLDEAVRFYVRAWRSGVLRRKLFPGFHPGVFLEHNAGKSEGDPLA NYLRAGQPDGPWRYGLITSEEAARPLSSSIRVALHLHVYYSELFPEIMARLKVNNVRPDLFISVPTECTRNEVTGLLNDY PGKVVDIQIVPNRGRDIGPLLTAFGSVFLDDYDAIGHLHTKKTADLSDEMIGKRWYTFLLENLLGGKRNMADIILGRMTA DPAIGIVFPDDPHVFDWGNNKAHADSLASKLGLGKLQENFVFPMGTMFWARTEALRPLFTLDLSWQDYPAEPLPYDGTIL HALERLLPLIAAKQSTRSVLTNVTGVTR >Mature_828_residues MKELPSNSVQKGNLLRLARRLSFKFHLARQNLIALVSDSPPREDLFDGDFYLAQYSDVAQAGIDPYEHFILYGRKEGRIG VPAYLPKLEYRGNLEAINHDRDTILVVSHEASRTGAPILSLNIVRELKKKYNVITLLLLNGGVIADDFLRASDIVIGPFS DGRNPDLVASGIDQLLALTPVTFAIVNSIESRAVLPGLARRFIPTVSLIHEFASYVRPVGSFREVVFWSSETIFSASLTY ENAISEYPDLRNCKFPVVPQGRCALPSPENEAALRLEEEAKVLAMLRPVDLPKDTVIILGAGTVEIRKGVDLFIACAAEI FKACPDALCRFVWIGSGYDPEHDGAYSVYLADQIRRSGLQERVFFLPATSSIETAYQAADIFLLSPRLDPLPNVAIDAMW HGLPVVCFARATGIADILIENGFEKICVARYFEISQLASKILALIKSRPMRQEIGRKLQQLVLNKFNIEHYVSQLEGIGF NAGKRVVNEQADILEIIKSGISRLDFYVPPWLEGQQLDEAVRFYVRAWRSGVLRRKLFPGFHPGVFLEHNAGKSEGDPLA NYLRAGQPDGPWRYGLITSEEAARPLSSSIRVALHLHVYYSELFPEIMARLKVNNVRPDLFISVPTECTRNEVTGLLNDY PGKVVDIQIVPNRGRDIGPLLTAFGSVFLDDYDAIGHLHTKKTADLSDEMIGKRWYTFLLENLLGGKRNMADIILGRMTA DPAIGIVFPDDPHVFDWGNNKAHADSLASKLGLGKLQENFVFPMGTMFWARTEALRPLFTLDLSWQDYPAEPLPYDGTIL HALERLLPLIAAKQSTRSVLTNVTGVTR
Specific function: Unknown
COG id: COG3754
COG function: function code M; Lipopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007739 [H]
Pfam domain/function: PF05045 RgpF [H]
EC number: NA
Molecular weight: Translated: 92368; Mature: 92368
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELPSNSVQKGNLLRLARRLSFKFHLARQNLIALVSDSPPREDLFDGDFYLAQYSDVAQ CCCCCCCCCCCCHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCEEEEHHHHHHH AGIDPYEHFILYGRKEGRIGVPAYLPKLEYRGNLEAINHDRDTILVVSHEASRTGAPILS HCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCEEH LNIVRELKKKYNVITLLLLNGGVIADDFLRASDIVIGPFSDGRNPDLVASGIDQLLALTP HHHHHHHHHHCCEEEEEEECCCEEHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH VTFAIVNSIESRAVLPGLARRFIPTVSLIHEFASYVRPVGSFREVVFWSSETIFSASLTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCEEEEECCH ENAISEYPDLRNCKFPVVPQGRCALPSPENEAALRLEEEAKVLAMLRPVDLPKDTVIILG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHCCCCCCCCCEEEEE AGTVEIRKGVDLFIACAAEIFKACPDALCRFVWIGSGYDPEHDGAYSVYLADQIRRSGLQ CCCEEECCCHHHHHHHHHHHHHHCHHHHHHHEECCCCCCCCCCCEEEEEEHHHHHHCCHH ERVFFLPATSSIETAYQAADIFLLSPRLDPLPNVAIDAMWHGLPVVCFARATGIADILIE HEEEEEECCCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHH NGFEKICVARYFEISQLASKILALIKSRPMRQEIGRKLQQLVLNKFNIEHYVSQLEGIGF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC NAGKRVVNEQADILEIIKSGISRLDFYVPPWLEGQQLDEAVRFYVRAWRSGVLRRKLFPG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC FHPGVFLEHNAGKSEGDPLANYLRAGQPDGPWRYGLITSEEAARPLSSSIRVALHLHVYY CCCCEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEEECHHHCCCCCCCCEEEEEEHHHH SELFPEIMARLKVNNVRPDLFISVPTECTRNEVTGLLNDYPGKVVDIQIVPNRGRDIGPL HHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH LTAFGSVFLDDYDAIGHLHTKKTADLSDEMIGKRWYTFLLENLLGGKRNMADIILGRMTA HHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC DPAIGIVFPDDPHVFDWGNNKAHADSLASKLGLGKLQENFVFPMGTMFWARTEALRPLFT CCEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCEEE LDLSWQDYPAEPLPYDGTILHALERLLPLIAAKQSTRSVLTNVTGVTR EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKELPSNSVQKGNLLRLARRLSFKFHLARQNLIALVSDSPPREDLFDGDFYLAQYSDVAQ CCCCCCCCCCCCHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCEEEEHHHHHHH AGIDPYEHFILYGRKEGRIGVPAYLPKLEYRGNLEAINHDRDTILVVSHEASRTGAPILS HCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCEEH LNIVRELKKKYNVITLLLLNGGVIADDFLRASDIVIGPFSDGRNPDLVASGIDQLLALTP HHHHHHHHHHCCEEEEEEECCCEEHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH VTFAIVNSIESRAVLPGLARRFIPTVSLIHEFASYVRPVGSFREVVFWSSETIFSASLTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCEEEEECCH ENAISEYPDLRNCKFPVVPQGRCALPSPENEAALRLEEEAKVLAMLRPVDLPKDTVIILG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHCCCCCCCCCEEEEE AGTVEIRKGVDLFIACAAEIFKACPDALCRFVWIGSGYDPEHDGAYSVYLADQIRRSGLQ CCCEEECCCHHHHHHHHHHHHHHCHHHHHHHEECCCCCCCCCCCEEEEEEHHHHHHCCHH ERVFFLPATSSIETAYQAADIFLLSPRLDPLPNVAIDAMWHGLPVVCFARATGIADILIE HEEEEEECCCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHH NGFEKICVARYFEISQLASKILALIKSRPMRQEIGRKLQQLVLNKFNIEHYVSQLEGIGF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC NAGKRVVNEQADILEIIKSGISRLDFYVPPWLEGQQLDEAVRFYVRAWRSGVLRRKLFPG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC FHPGVFLEHNAGKSEGDPLANYLRAGQPDGPWRYGLITSEEAARPLSSSIRVALHLHVYY CCCCEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEEECHHHCCCCCCCCEEEEEEHHHH SELFPEIMARLKVNNVRPDLFISVPTECTRNEVTGLLNDYPGKVVDIQIVPNRGRDIGPL HHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH LTAFGSVFLDDYDAIGHLHTKKTADLSDEMIGKRWYTFLLENLLGGKRNMADIILGRMTA HHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC DPAIGIVFPDDPHVFDWGNNKAHADSLASKLGLGKLQENFVFPMGTMFWARTEALRPLFT CCEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCEEE LDLSWQDYPAEPLPYDGTILHALERLLPLIAAKQSTRSVLTNVTGVTR EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9385134 [H]