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The map label for this gene is rfbA [H]

Identifier: 82703512

GI number: 82703512

Start: 2730545

End: 2731366

Strand: Direct

Name: rfbA [H]

Synonym: Nmul_A2397

Alternate gene names: 82703512

Gene position: 2730545-2731366 (Clockwise)

Preceding gene: 82703503

Following gene: 82703513

Centisome position: 85.75

GC content: 51.58

Gene sequence:

>822_bases
ATGCAAAATTTTTCCATTCTTCCACATGAAATGGCCGCAAGTCTCTGGCGCAACAGAGATTTGATTGTCGCGCTTACCAA
ACGTGAAGTCATCGGGCGCTACCGCGGCTCTGTCATGGGCATGGCGTGGTCCTTCTTCAACCCATTGCTCATGCTCGTGA
TTTATACGTTCGTATTTTCAGTGGTGTTCAAGGCGCGCTGGGGAGTGGGTGGAGAAGAAAGCAAAGCAGATTTCGCGATT
ATTCTTTTTGTCGGCATGATCGTGCATGGCCTGTTCGCCGAGTGCATCAACCGCGCACCCGCCTTGATCCTGTCGAACGT
CAATTACGTGAAAAAAGTCATTTTCCCGCTGGAAATACTCCCTTGGGTAGCATTCGGCTCCGCGCTGTTTCACACGGTTA
TCAGCGTTGGCGTGCTGTTGCTGGCACAGCTCCTTATCAGCCATCAACTGCCCTGGACTGTGATCCTTTTTCCCTTGGTC
CTGCTTCCGCTCATTTTTATTTCGATGGGCTTTGCCTGGTTCCTGGCAGCCTTTGGCGTATTCGTGCGCGATATCGGACA
GCTCACGGGAATGTTCACCACCGTGCTATTGTTTCTTTCCCCCGTGTTTTACCCCTTGAGCATCCTGCCTGAAAAATACC
AGGGTTTATTACAGCTTAACCCGCTTGCGTTCATCATCGAGGAAGGAAGAAAGGTGCTCGTCTTCGGACAACTGCCGGAC
TTCGGTCACTGGAGCACCATGATGATTGCCTCCTTGCTGATGGCATGGGCAGGATTCGCCTGGTTTCAGAAAACCCGCAA
GGGATTTGCCGATGTTCTCTGA

Upstream 100 bases:

>100_bases
ATCACACCCTGCAACATCACCATTATTCGCATCCTGCAGGCTCGCATGGATACTTCCCGTCATCTGTAGAACACCCGCGC
AAAGCTGTCCTGTGCGCTAA

Downstream 100 bases:

>100_bases
AGGAGAAAACGTCGCCAAAGCGACAATCCCGCTCGCTCTTGAATCAGCGGAGAAGAATCTCGAAACGAGCAACGAAAATG
AAAAGGCAAGGAGAAGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MQNFSILPHEMAASLWRNRDLIVALTKREVIGRYRGSVMGMAWSFFNPLLMLVIYTFVFSVVFKARWGVGGEESKADFAI
ILFVGMIVHGLFAECINRAPALILSNVNYVKKVIFPLEILPWVAFGSALFHTVISVGVLLLAQLLISHQLPWTVILFPLV
LLPLIFISMGFAWFLAAFGVFVRDIGQLTGMFTTVLLFLSPVFYPLSILPEKYQGLLQLNPLAFIIEEGRKVLVFGQLPD
FGHWSTMMIASLLMAWAGFAWFQKTRKGFADVL

Sequences:

>Translated_273_residues
MQNFSILPHEMAASLWRNRDLIVALTKREVIGRYRGSVMGMAWSFFNPLLMLVIYTFVFSVVFKARWGVGGEESKADFAI
ILFVGMIVHGLFAECINRAPALILSNVNYVKKVIFPLEILPWVAFGSALFHTVISVGVLLLAQLLISHQLPWTVILFPLV
LLPLIFISMGFAWFLAAFGVFVRDIGQLTGMFTTVLLFLSPVFYPLSILPEKYQGLLQLNPLAFIIEEGRKVLVFGQLPD
FGHWSTMMIASLLMAWAGFAWFQKTRKGFADVL
>Mature_273_residues
MQNFSILPHEMAASLWRNRDLIVALTKREVIGRYRGSVMGMAWSFFNPLLMLVIYTFVFSVVFKARWGVGGEESKADFAI
ILFVGMIVHGLFAECINRAPALILSNVNYVKKVIFPLEILPWVAFGSALFHTVISVGVLLLAQLLISHQLPWTVILFPLV
LLPLIFISMGFAWFLAAFGVFVRDIGQLTGMFTTVLLFLSPVFYPLSILPEKYQGLLQLNPLAFIIEEGRKVLVFGQLPD
FGHWSTMMIASLLMAWAGFAWFQKTRKGFADVL

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30769; Mature: 30769

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]