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The map label for this gene is scpB [H]

Identifier: 82703436

GI number: 82703436

Start: 2637168

End: 2637803

Strand: Direct

Name: scpB [H]

Synonym: Nmul_A2319

Alternate gene names: 82703436

Gene position: 2637168-2637803 (Clockwise)

Preceding gene: 82703435

Following gene: 82703444

Centisome position: 82.82

GC content: 56.13

Gene sequence:

>636_bases
ATGTCCGACCGATCAGCGTCCTTACCACCGTCTAATTTCTCCGTTTCATCCCCTGCTCAGGTTAAAAAGGTTCTGGAAGC
TGCATTACTTACCAGCCCGGAACCCCTCCCTCTGGCGGAACTGAAAAAACTGTTCGCGGGTGAACTGGGCTCGGAAATCC
TGCGGCGCCTGCTGGACGAGTTGAACAGAGACTGGGAAGGAAGAGGGGTGGAACTCGTGCAGGTCGCAGGCGGGTGGCGC
TTTCAGGCTCGAGCGGAAATGCAGGAATTTCTCGACCGCCTCAATCCGCAAAAGCCACCCCGCTATTCGCGGGCGGTATT
GGAAACGCTCGCCATCATTGCGTATCGCCAGCCGGCGACGCGCGGGGATATCGAGGAGATACGGGGCGTTGCGGTCGCAA
GTTCAGTGCTAAAGGCACTGGAATCAAGAGGCTGGATATCTGCCGTCGGTCACCGTGAGGTACCGGGTCGACCCATCTTG
TATGCTACGACCGTTGAATTTCTTAATGATCTTGGACTTCGCTCCCTGGAAGAATTGCCGCCATTGGAAGAACTGGGCTC
ACTGATTGAACCGAAGGAAAGCGTGGAACAACTGCCTGATCCAGAGAACATGCCCCAACCAGGCAATCCCGATTGA

Upstream 100 bases:

>100_bases
GCCGGAGCAGCGGAGCTTGTGGTGACGTTTCTGGCGTTATTGGAGCTTGTGAAGGAACGCCAGGTGGAGGTCAGTCAGCC
GTCCGCTTTTGGAATGATTT

Downstream 100 bases:

>100_bases
ACATGAGGGGGCCAGGAGGAGTTATGGCTCAATTGTAATTCAAGGCAGCCTTCCTTCCGGAAAGACTGCATTTCGCCTTT
CTCCCTTCCCCTCTTCTGAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSDRSASLPPSNFSVSSPAQVKKVLEAALLTSPEPLPLAELKKLFAGELGSEILRRLLDELNRDWEGRGVELVQVAGGWR
FQARAEMQEFLDRLNPQKPPRYSRAVLETLAIIAYRQPATRGDIEEIRGVAVASSVLKALESRGWISAVGHREVPGRPIL
YATTVEFLNDLGLRSLEELPPLEELGSLIEPKESVEQLPDPENMPQPGNPD

Sequences:

>Translated_211_residues
MSDRSASLPPSNFSVSSPAQVKKVLEAALLTSPEPLPLAELKKLFAGELGSEILRRLLDELNRDWEGRGVELVQVAGGWR
FQARAEMQEFLDRLNPQKPPRYSRAVLETLAIIAYRQPATRGDIEEIRGVAVASSVLKALESRGWISAVGHREVPGRPIL
YATTVEFLNDLGLRSLEELPPLEELGSLIEPKESVEQLPDPENMPQPGNPD
>Mature_210_residues
SDRSASLPPSNFSVSSPAQVKKVLEAALLTSPEPLPLAELKKLFAGELGSEILRRLLDELNRDWEGRGVELVQVAGGWRF
QARAEMQEFLDRLNPQKPPRYSRAVLETLAIIAYRQPATRGDIEEIRGVAVASSVLKALESRGWISAVGHREVPGRPILY
ATTVEFLNDLGLRSLEELPPLEELGSLIEPKESVEQLPDPENMPQPGNPD

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 23309; Mature: 23178

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRSASLPPSNFSVSSPAQVKKVLEAALLTSPEPLPLAELKKLFAGELGSEILRRLLDE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LNRDWEGRGVELVQVAGGWRFQARAEMQEFLDRLNPQKPPRYSRAVLETLAIIAYRQPAT
HCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
RGDIEEIRGVAVASSVLKALESRGWISAVGHREVPGRPILYATTVEFLNDLGLRSLEELP
CCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHCC
PLEELGSLIEPKESVEQLPDPENMPQPGNPD
CHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDRSASLPPSNFSVSSPAQVKKVLEAALLTSPEPLPLAELKKLFAGELGSEILRRLLDE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LNRDWEGRGVELVQVAGGWRFQARAEMQEFLDRLNPQKPPRYSRAVLETLAIIAYRQPAT
HCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
RGDIEEIRGVAVASSVLKALESRGWISAVGHREVPGRPILYATTVEFLNDLGLRSLEELP
CCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHCC
PLEELGSLIEPKESVEQLPDPENMPQPGNPD
CHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]