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The map label for this gene is slp [H]

Identifier: 82703378

GI number: 82703378

Start: 2570826

End: 2571371

Strand: Direct

Name: slp [H]

Synonym: Nmul_A2260

Alternate gene names: 82703378

Gene position: 2570826-2571371 (Clockwise)

Preceding gene: 82703377

Following gene: 82703379

Centisome position: 80.74

GC content: 51.28

Gene sequence:

>546_bases
ATGAGACCATACTTGTTATTCGTCTGTATCTTCTTGAGCGCGTGCGTCGGACTGCCGGCAGCAGTGCGAGACGTACCGGT
GGCAAAAGTCGGCTATGGCGAAGTAAGTCAGGACCCCAACAGCTATAAGGCTACATCCGTCCGTTGGGGGGGCGTGGTGA
TTGATGTTGAAAATGAAGAAAACTTCACCCTGGTGCAGGTGCTGTCCTATCCCCTCAATTATTCCGGACGGCCGCAACTG
AACAAACAGAGCGAGGGACGTTTCGTGATCAAGAGCTCCGAATTTCTGGATCCTGCCGTTTATGCAAAGGATAGAGAACT
CACAGTTGCGGGAACAATCGAAGGTGATATCGAGCGTACGATAGGAAAAAAACACGTGCGTCTGCCTCTGCTTTCTTCCA
AAGGCATTTATCTATGGCCGGTGTACCAATATCAGCCTTACGCTTATGGCGGGCCCGGCTACGGCTTCAGTCCATACTTC
GGATATGGATATTATTATGGCGGCCCCTATTGGGGAGGATTCTACCGCCCCTACTGGTGGTATTAG

Upstream 100 bases:

>100_bases
AGATTAAACTATGCTTGTAGTGGCTATATAAGAAATTCCAATTCTAGGCGAAGATGGCAAATAAACAATCCATGGGCGTG
TTTTCATGAAAGGAAAAAAA

Downstream 100 bases:

>100_bases
CAACCGTTTGACAAGTCCTCCTTGAGCATTCTCGGTAAAGTCGGGATAATCATCACCCCGATGGAATGCATCGCCTTCAT
GGCGCGGTTTGCATGCCTTG

Product: Slp family outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRPYLLFVCIFLSACVGLPAAVRDVPVAKVGYGEVSQDPNSYKATSVRWGGVVIDVENEENFTLVQVLSYPLNYSGRPQL
NKQSEGRFVIKSSEFLDPAVYAKDRELTVAGTIEGDIERTIGKKHVRLPLLSSKGIYLWPVYQYQPYAYGGPGYGFSPYF
GYGYYYGGPYWGGFYRPYWWY

Sequences:

>Translated_181_residues
MRPYLLFVCIFLSACVGLPAAVRDVPVAKVGYGEVSQDPNSYKATSVRWGGVVIDVENEENFTLVQVLSYPLNYSGRPQL
NKQSEGRFVIKSSEFLDPAVYAKDRELTVAGTIEGDIERTIGKKHVRLPLLSSKGIYLWPVYQYQPYAYGGPGYGFSPYF
GYGYYYGGPYWGGFYRPYWWY
>Mature_181_residues
MRPYLLFVCIFLSACVGLPAAVRDVPVAKVGYGEVSQDPNSYKATSVRWGGVVIDVENEENFTLVQVLSYPLNYSGRPQL
NKQSEGRFVIKSSEFLDPAVYAKDRELTVAGTIEGDIERTIGKKHVRLPLLSSKGIYLWPVYQYQPYAYGGPGYGFSPYF
GYGYYYGGPYWGGFYRPYWWY

Specific function: The induction of slp may help to stabilize the outer membrane during carbon starvation and stationary phase [H]

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082278, Length=173, Percent_Identity=27.7456647398844, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1788108, Length=152, Percent_Identity=28.2894736842105, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 20560; Mature: 20560

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPYLLFVCIFLSACVGLPAAVRDVPVAKVGYGEVSQDPNSYKATSVRWGGVVIDVENEE
CCHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCCCCCCEEEEEEECEEEEEEECCC
NFTLVQVLSYPLNYSGRPQLNKQSEGRFVIKSSEFLDPAVYAKDRELTVAGTIEGDIERT
CEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCEEEEEEECCCCHHHH
IGKKHVRLPLLSSKGIYLWPVYQYQPYAYGGPGYGFSPYFGYGYYYGGPYWGGFYRPYWW
CCCCEEEEEEECCCCEEEEEEEEECCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Y
C
>Mature Secondary Structure
MRPYLLFVCIFLSACVGLPAAVRDVPVAKVGYGEVSQDPNSYKATSVRWGGVVIDVENEE
CCHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCCCCCCEEEEEEECEEEEEEECCC
NFTLVQVLSYPLNYSGRPQLNKQSEGRFVIKSSEFLDPAVYAKDRELTVAGTIEGDIERT
CEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCEEEEEEECCCCHHHH
IGKKHVRLPLLSSKGIYLWPVYQYQPYAYGGPGYGFSPYFGYGYYYGGPYWGGFYRPYWW
CCCCEEEEEEECCCCEEEEEEEEECCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022277; 8041620; 9278503 [H]