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The map label for this gene is 82702744

Identifier: 82702744

GI number: 82702744

Start: 1856881

End: 1858128

Strand: Direct

Name: 82702744

Synonym: Nmul_A1617

Alternate gene names: NA

Gene position: 1856881-1858128 (Clockwise)

Preceding gene: 82702743

Following gene: 82702748

Centisome position: 58.31

GC content: 56.97

Gene sequence:

>1248_bases
ATGTCCGACGCTGATTCACCCATGGAAGCCGAGCCGCCATTCGTGCAGCCGACCTTGAAAGCAAAGAAAGGAAGAGGAGC
GGTATCCAATCTCCAGGGGCGGTACGAGCAATGGACGCGTCAAACCATCGATGATGGCTGGGGAAATGACGGTCTCATCG
GAACCGCCGACAGAGACAAGACAGAAGATGACGAGCCGGACACAAGCTCGACATGGAAGACCCAGATCATCGAGGAACAT
GCCAAAACCATACTAAGCCGCAATCAGTCGCCGGATGTGCCGTTCAGTATTTCGCTCAATCCTTATCGCGGATGCGAACA
TGGTTGCATCTACTGTTTCGCGCGTCCCACTCACAGTTACCTGGGTTTGTCGCCCGGGCTGGATTTCGAAAGCAAAATAT
TCGCCAAGATCAATGCACCGGAGCTTTTGAGACGGGAGCTGGCAAAACAATCATATGTGCCGGAACCCATCGCGCTCGGC
GTCAATACGGACGCATATCAGCCCTGCGAGCGCGACTTGCGGTTGACACGGCGCGTGCTGGAAGTGCTACGTGAGTGCGA
ACATCCGGTTGCCTTGATTTCCAAGTCATCGCTGATGGAACGCGACATGGATTTGCTCTCCGATATGGCTTCAAGACGAT
TGGCTGTGGCCGCGGTGACAATCACCACTCTCGATCCCGCGGTTGCGCGCACGCTCGAACCGCGGGCAACCGCTCCGGCA
CGCCGTCTACGGACGATTCGCACGCTGACGGATGCCGGAATTCCGGTCGGCGTCAGCGTTGCACCGGTGATTCCGTTTGT
CACCGAGCCCGATCTGGAGCGAGTACTGACGGCAGCAGCAGAAGCCGGAGCAATCAATGCAGGCTATGTCATGTTGCGCC
TGCCGTGGGAGATCAGCCCCCTGTTCAGGCAGTGGCTGGAAGCACATTTTCCTGATCGCGCTGCCCGGGTCATGAACCGG
GTGCGCGACATCAGGGGTGGCAAGGATTACGATTCGAGCTTCGGCAGGCGCATGCGCGGCGAGGGCATCTGGGCCGACCT
GATTCGGCAGCGATTCGACAAAACGGTGAAACGCCTTGGGCTCAGTGCGCATTCGCACCGATTCACAGGACTGGACAGCT
CGCGTTTCCGTGCGCCTTCTGTCAATCCAGTAGCTCTCCAATCACCCATGAGCGAAAAATCGAAGGGAAAGGATTGGAAA
GCAAAAACCGGAGAGCAAAAACCAAACGACCAGCTTGAGCTTTTTTGA

Upstream 100 bases:

>100_bases
CGACAAGCCAAACACAAGCGAATAATGTAAGCCTGGGGACCGAGCCTGATTTCATCGCTTCCAGCCATGGCCATACAACG
TCTATTTCTAATGCACTCCC

Downstream 100 bases:

>100_bases
TGGAATGTTTTCCAGATTAGCAGGAGCAGGCCTCGGCAGGTTCATGGCGCGGGCACATCAGCTATGCCTGACGATCCGTT
TATCGTTCGGCAGAACTGAC

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSDADSPMEAEPPFVQPTLKAKKGRGAVSNLQGRYEQWTRQTIDDGWGNDGLIGTADRDKTEDDEPDTSSTWKTQIIEEH
AKTILSRNQSPDVPFSISLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESKIFAKINAPELLRRELAKQSYVPEPIALG
VNTDAYQPCERDLRLTRRVLEVLRECEHPVALISKSSLMERDMDLLSDMASRRLAVAAVTITTLDPAVARTLEPRATAPA
RRLRTIRTLTDAGIPVGVSVAPVIPFVTEPDLERVLTAAAEAGAINAGYVMLRLPWEISPLFRQWLEAHFPDRAARVMNR
VRDIRGGKDYDSSFGRRMRGEGIWADLIRQRFDKTVKRLGLSAHSHRFTGLDSSRFRAPSVNPVALQSPMSEKSKGKDWK
AKTGEQKPNDQLELF

Sequences:

>Translated_415_residues
MSDADSPMEAEPPFVQPTLKAKKGRGAVSNLQGRYEQWTRQTIDDGWGNDGLIGTADRDKTEDDEPDTSSTWKTQIIEEH
AKTILSRNQSPDVPFSISLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESKIFAKINAPELLRRELAKQSYVPEPIALG
VNTDAYQPCERDLRLTRRVLEVLRECEHPVALISKSSLMERDMDLLSDMASRRLAVAAVTITTLDPAVARTLEPRATAPA
RRLRTIRTLTDAGIPVGVSVAPVIPFVTEPDLERVLTAAAEAGAINAGYVMLRLPWEISPLFRQWLEAHFPDRAARVMNR
VRDIRGGKDYDSSFGRRMRGEGIWADLIRQRFDKTVKRLGLSAHSHRFTGLDSSRFRAPSVNPVALQSPMSEKSKGKDWK
AKTGEQKPNDQLELF
>Mature_414_residues
SDADSPMEAEPPFVQPTLKAKKGRGAVSNLQGRYEQWTRQTIDDGWGNDGLIGTADRDKTEDDEPDTSSTWKTQIIEEHA
KTILSRNQSPDVPFSISLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESKIFAKINAPELLRRELAKQSYVPEPIALGV
NTDAYQPCERDLRLTRRVLEVLRECEHPVALISKSSLMERDMDLLSDMASRRLAVAAVTITTLDPAVARTLEPRATAPAR
RLRTIRTLTDAGIPVGVSVAPVIPFVTEPDLERVLTAAAEAGAINAGYVMLRLPWEISPLFRQWLEAHFPDRAARVMNRV
RDIRGGKDYDSSFGRRMRGEGIWADLIRQRFDKTVKRLGLSAHSHRFTGLDSSRFRAPSVNPVALQSPMSEKSKGKDWKA
KTGEQKPNDQLELF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 46437; Mature: 46306

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDADSPMEAEPPFVQPTLKAKKGRGAVSNLQGRYEQWTRQTIDDGWGNDGLIGTADRDK
CCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
TEDDEPDTSSTWKTQIIEEHAKTILSRNQSPDVPFSISLNPYRGCEHGCIYCFARPTHSY
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHH
LGLSPGLDFESKIFAKINAPELLRRELAKQSYVPEPIALGVNTDAYQPCERDLRLTRRVL
CCCCCCCCCCCHHEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
EVLRECEHPVALISKSSLMERDMDLLSDMASRRLAVAAVTITTLDPAVARTLEPRATAPA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHCCCCCCCHH
RRLRTIRTLTDAGIPVGVSVAPVIPFVTEPDLERVLTAAAEAGAINAGYVMLRLPWEISP
HHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCH
LFRQWLEAHFPDRAARVMNRVRDIRGGKDYDSSFGRRMRGEGIWADLIRQRFDKTVKRLG
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
LSAHSHRFTGLDSSRFRAPSVNPVALQSPMSEKSKGKDWKAKTGEQKPNDQLELF
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDADSPMEAEPPFVQPTLKAKKGRGAVSNLQGRYEQWTRQTIDDGWGNDGLIGTADRDK
CCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
TEDDEPDTSSTWKTQIIEEHAKTILSRNQSPDVPFSISLNPYRGCEHGCIYCFARPTHSY
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHH
LGLSPGLDFESKIFAKINAPELLRRELAKQSYVPEPIALGVNTDAYQPCERDLRLTRRVL
CCCCCCCCCCCHHEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
EVLRECEHPVALISKSSLMERDMDLLSDMASRRLAVAAVTITTLDPAVARTLEPRATAPA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHCCCCCCCHH
RRLRTIRTLTDAGIPVGVSVAPVIPFVTEPDLERVLTAAAEAGAINAGYVMLRLPWEISP
HHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCH
LFRQWLEAHFPDRAARVMNRVRDIRGGKDYDSSFGRRMRGEGIWADLIRQRFDKTVKRLG
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
LSAHSHRFTGLDSSRFRAPSVNPVALQSPMSEKSKGKDWKAKTGEQKPNDQLELF
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]