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The map label for this gene is ybhP [H]

Identifier: 82702653

GI number: 82702653

Start: 1743629

End: 1744315

Strand: Direct

Name: ybhP [H]

Synonym: Nmul_A1524

Alternate gene names: 82702653

Gene position: 1743629-1744315 (Clockwise)

Preceding gene: 82702652

Following gene: 82702656

Centisome position: 54.76

GC content: 55.31

Gene sequence:

>687_bases
ATGCAAATGACACTGGCTACCTACAATATACACGGCTGTATCGGCGCCGACGGACGCTTTAAACCTGACCGTATCATAGA
CGTTCTGCAGGAGATGAATGCGGATATAATTGCTCTGCAGGAAGTAGAGCATCACCAGGTTGAAGGGTATGACCTGCTGG
ATTATTTCGCCGTAAAGACCGGGTTCACCGCCATTGCCGGACCCACCCTGGTACGCCGCACACACCACTATGGAAACGCC
CTGTTGACGAAGCTTCCGGTCCTGGCAGTAAATCGGATAGATCTTACCCTGCCTGGCCGGGAGCCGCGCGGAGCGCTCGA
TGTCACTCTTGCCTGGAATGACCGGCGGGTGCACGTGGTTGCCACCCATCTCGGTCTGCGACCTTCGGAACGACGGCAAC
AGGTACGCCACTTGCTTAAGCTGTTTGAAATCCGTCTTACGGAGATATATGTATTAATGGGCGATCTCAATGAGTGGTTT
CTGTGGGGACGCCCTCTTCGCTGGTTGCACGCTCACTTCAAGCGTCCTCCTCACTGCGCCACATTTCCCGCGCGGAAACC
TTTCATGGCGCTGGACCGTCTATGGGTGCATCCGCGCCGTCGCCTGAAAAGCCTCGAAGCTCATAGCAGCAGCCTCGCAA
GGATTGCATCGGATCACCTGCCCCTGAAAGCCATAATAGAAATCTGA

Upstream 100 bases:

>100_bases
GTTACTCAATCTGACTGAAGCTCGCCGACTTTCTGCTTTCGGCCCGGCGGTTTTCAGTTTAAATGTCTGTCTTACAGAAA
ACCGGGATTCATGAAATTCT

Downstream 100 bases:

>100_bases
GCGGTTGATCCCTGATATCTGCGCAATCGGGATTTATGCCAGTTCATCCCCGTCCAGGAATTATCTTTCTACTCGGTTGC
TTTGACCCTTTATAGACAAG

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MQMTLATYNIHGCIGADGRFKPDRIIDVLQEMNADIIALQEVEHHQVEGYDLLDYFAVKTGFTAIAGPTLVRRTHHYGNA
LLTKLPVLAVNRIDLTLPGREPRGALDVTLAWNDRRVHVVATHLGLRPSERRQQVRHLLKLFEIRLTEIYVLMGDLNEWF
LWGRPLRWLHAHFKRPPHCATFPARKPFMALDRLWVHPRRRLKSLEAHSSSLARIASDHLPLKAIIEI

Sequences:

>Translated_228_residues
MQMTLATYNIHGCIGADGRFKPDRIIDVLQEMNADIIALQEVEHHQVEGYDLLDYFAVKTGFTAIAGPTLVRRTHHYGNA
LLTKLPVLAVNRIDLTLPGREPRGALDVTLAWNDRRVHVVATHLGLRPSERRQQVRHLLKLFEIRLTEIYVLMGDLNEWF
LWGRPLRWLHAHFKRPPHCATFPARKPFMALDRLWVHPRRRLKSLEAHSSSLARIASDHLPLKAIIEI
>Mature_228_residues
MQMTLATYNIHGCIGADGRFKPDRIIDVLQEMNADIIALQEVEHHQVEGYDLLDYFAVKTGFTAIAGPTLVRRTHHYGNA
LLTKLPVLAVNRIDLTLPGREPRGALDVTLAWNDRRVHVVATHLGLRPSERRQQVRHLLKLFEIRLTEIYVLMGDLNEWF
LWGRPLRWLHAHFKRPPHCATFPARKPFMALDRLWVHPRRRLKSLEAHSSSLARIASDHLPLKAIIEI

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=249, Percent_Identity=31.3253012048193, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 26295; Mature: 26295

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMTLATYNIHGCIGADGRFKPDRIIDVLQEMNADIIALQEVEHHQVEGYDLLDYFAVKT
CCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHCCCCCHHHHHHHHHH
GFTAIAGPTLVRRTHHYGNALLTKLPVLAVNRIDLTLPGREPRGALDVTLAWNDRRVHVV
CCHHHCCCHHHHHHHHHCHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEEECCCEEEEE
ATHLGLRPSERRQQVRHLLKLFEIRLTEIYVLMGDLNEWFLWGRPLRWLHAHFKRPPHCA
EEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCCCHHHHHHHHCCCCCCC
TFPARKPFMALDRLWVHPRRRLKSLEAHSSSLARIASDHLPLKAIIEI
CCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MQMTLATYNIHGCIGADGRFKPDRIIDVLQEMNADIIALQEVEHHQVEGYDLLDYFAVKT
CCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHCCCCCHHHHHHHHHH
GFTAIAGPTLVRRTHHYGNALLTKLPVLAVNRIDLTLPGREPRGALDVTLAWNDRRVHVV
CCHHHCCCHHHHHHHHHCHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEEECCCEEEEE
ATHLGLRPSERRQQVRHLLKLFEIRLTEIYVLMGDLNEWFLWGRPLRWLHAHFKRPPHCA
EEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCCCHHHHHHHHCCCCCCC
TFPARKPFMALDRLWVHPRRRLKSLEAHSSSLARIASDHLPLKAIIEI
CCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]