| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is ydjX [H]
Identifier: 82702652
GI number: 82702652
Start: 1741393
End: 1743546
Strand: Direct
Name: ydjX [H]
Synonym: Nmul_A1523
Alternate gene names: 82702652
Gene position: 1741393-1743546 (Clockwise)
Preceding gene: 82702651
Following gene: 82702653
Centisome position: 54.69
GC content: 55.11
Gene sequence:
>2154_bases ATGAACGGATCATCCATCCTGAAGCCGGGGAATAATTGCTGGCGCATCGAGCACGCGCACAAGGCTGCCTTTATCGTTGA TGGAGCAGATTTTTTTCGTGCTTTCCGGGAAACGGTAAAACGCGCCCGCCGTTCCGTATTGATCATGGCCTGGGATATCG ACAGCAGGCTGAAACTGGTACGGAATGAAGAACCCGATGGCTGGCCGACCACCCTCGGGGATTTCCTCAACAGCCTCGTC AAACGTAACAGAAATCTCCATGTTCATGTCCTCGACTGGGATTTCGTCATGCTGTTTGCAGCTGACCGAGAATGGCTTCC TCTCTATAAACAACGATGGAATGGCCACCGACGCTTGCATTTTCATCTTGATGATCATCATCCCACCGGAGCCTCCCATC ACCAGAAAGTCGTGGTAGTTGACGACCAGGTGGCATTTGTGGGAGGGCTGGACCTGACGCTGGGTCGCTGGGACACGACC GAGCACGCGGCGTGTGACGAGCGGCGCAGGGATTTGCTGACAGAACCCATACCGCAGCCTTACCACGATATCCAGATGAT GGTTTCCGGCCCGATCGCCAGCGCACTGGGAGAATTGGCGCGTGAACGGTGGTTCCTTGCAACGGGACAGAAACTTTCTG CTCCCAGGGTCAGGAGAGAAACAGACTACTGGCCGGATTATCTTGCACCCGACGTTGAGAACATCGAGGTTGCGATCGCC CGCACTGTTCCCGAATATGAAAACCAGAAAGAAGTGCGCGAGGTGGAACGGCTGGTGCTGGACTTGATCGCTTCCGCACG CCACAGCATCTACATAGAAGCGCAATATTTTACTTCCCACATCATAACGGATGCATTGGTTCGGCGGCTGGAAGAAGAAA GCGGTCCGGAGATCGTCGTGCTGCTGGCGGAACAAACAGTCGGTTGGTTATCGCAATACACCATGGATGTGCTGCGCGAG CGCTCGCTCAAGCGGTTGGTCACCGCAGATCGGTATCACCGCCTGGCCCTTTATGAGCCGTGCATCCCCGGCCTTGTCAA CGAATGCGTGAACGTCCACTCCAAAATTATCATCATTGATAATGAGCGGTTGCGTATCGGATCAGCCAATCTCAATAATC GCTCCATGGGACTGGATACCGAATGCGATCTTATGCTTGAAGCGAATGGCAGAGAGAATGTAAGCCGGGCAATAGCTGGT TTTAGGGCACGCCTGCTTGCCGAACATTTAGGCATGCATGCCAGTATCATCGAAGAACGCATGGCGCGGGAAGGATCTTT GATCCGTACGATCGAAGCGTTGCGAGGTCATGGTCGTACCGTACGGCCGTGGCAGTTTCGAGTCGCCGCCGATGTGGATG CCCTGGTGCCGGACGAAGATATCGTGGACCCTGGCAAGCCGCTTGATGCGGGCTTGCTGATGGGGAAGCTTATTCCCGAG GGAGAACGCGCACCTGTACGAAGTCACATCGGTCTCATTGTATCGATACTGATCAGTGTATTGGCGCTCGCTGCCGCCTG GCGCTGGTCGCCTCTCAAGGAATGGATAGATGTCAGCACCCTGGTAACGCTTGCCGCCGAATTCGAGCGCGCTCCAGCTG CTCCATTCATTACGCTCGCCATATTCCTTCTCGGCGGTTTGATTGCATTTCCACTCACTGTGCTTATCATGGTATGCGCT CTGGTATTTGGTCCCTGGTACGGTTTTCTCTATTCGATGGGGGGCGCGCTATTGAGTGCTGCCTCCAGCTACGGTATCGG CCACTTGGTAGGACGCCATACAGTTTGGCGCTTTGCCGGAAAAAAAATCCGGGACCTGAACAAACGCCTGGCCCGACGCG GTCTGATGACAATCATCGCTCTCAGGATCATACCGCTCGCTCCCTTCACGGTCGTCAATCTCGTTGCAGGGGCGTCGCGG ATTCGTTTCCGGGATTTCATGCTGGGAAGCTCAGTAGGCTTGCTGCCCGGGATAACCAGCATATCCGTCTTTACGGATCA GCTGGCTGCCACCATCCAGAAACCTGACCTGCCGGCGTTTGCAGCATTGGTTGCAGTTGCTGCGATCATAATCGTCATCG CATGGACATGCTGGAGATGGGCGAGCCGACGGCGCGAGACGATGAACCTTTCACCAGTTACTCAATCTGACTGA
Upstream 100 bases:
>100_bases AGTCGACTCACAGAACCTCTAACCGCTGCTCGTGCGAGAGTGCAAGTTTTAAGCCCTGCAAAAGTCTTTATCATACTTCC CGGTGCAAACCTTAAAAGCA
Downstream 100 bases:
>100_bases AGCTCGCCGACTTTCTGCTTTCGGCCCGGCGGTTTTCAGTTTAAATGTCTGTCTTACAGAAAACCGGGATTCATGAAATT CTATGCAAATGACACTGGCT
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 717; Mature: 717
Protein sequence:
>717_residues MNGSSILKPGNNCWRIEHAHKAAFIVDGADFFRAFRETVKRARRSVLIMAWDIDSRLKLVRNEEPDGWPTTLGDFLNSLV KRNRNLHVHVLDWDFVMLFAADREWLPLYKQRWNGHRRLHFHLDDHHPTGASHHQKVVVVDDQVAFVGGLDLTLGRWDTT EHAACDERRRDLLTEPIPQPYHDIQMMVSGPIASALGELARERWFLATGQKLSAPRVRRETDYWPDYLAPDVENIEVAIA RTVPEYENQKEVREVERLVLDLIASARHSIYIEAQYFTSHIITDALVRRLEEESGPEIVVLLAEQTVGWLSQYTMDVLRE RSLKRLVTADRYHRLALYEPCIPGLVNECVNVHSKIIIIDNERLRIGSANLNNRSMGLDTECDLMLEANGRENVSRAIAG FRARLLAEHLGMHASIIEERMAREGSLIRTIEALRGHGRTVRPWQFRVAADVDALVPDEDIVDPGKPLDAGLLMGKLIPE GERAPVRSHIGLIVSILISVLALAAAWRWSPLKEWIDVSTLVTLAAEFERAPAAPFITLAIFLLGGLIAFPLTVLIMVCA LVFGPWYGFLYSMGGALLSAASSYGIGHLVGRHTVWRFAGKKIRDLNKRLARRGLMTIIALRIIPLAPFTVVNLVAGASR IRFRDFMLGSSVGLLPGITSISVFTDQLAATIQKPDLPAFAALVAVAAIIIVIAWTCWRWASRRRETMNLSPVTQSD
Sequences:
>Translated_717_residues MNGSSILKPGNNCWRIEHAHKAAFIVDGADFFRAFRETVKRARRSVLIMAWDIDSRLKLVRNEEPDGWPTTLGDFLNSLV KRNRNLHVHVLDWDFVMLFAADREWLPLYKQRWNGHRRLHFHLDDHHPTGASHHQKVVVVDDQVAFVGGLDLTLGRWDTT EHAACDERRRDLLTEPIPQPYHDIQMMVSGPIASALGELARERWFLATGQKLSAPRVRRETDYWPDYLAPDVENIEVAIA RTVPEYENQKEVREVERLVLDLIASARHSIYIEAQYFTSHIITDALVRRLEEESGPEIVVLLAEQTVGWLSQYTMDVLRE RSLKRLVTADRYHRLALYEPCIPGLVNECVNVHSKIIIIDNERLRIGSANLNNRSMGLDTECDLMLEANGRENVSRAIAG FRARLLAEHLGMHASIIEERMAREGSLIRTIEALRGHGRTVRPWQFRVAADVDALVPDEDIVDPGKPLDAGLLMGKLIPE GERAPVRSHIGLIVSILISVLALAAAWRWSPLKEWIDVSTLVTLAAEFERAPAAPFITLAIFLLGGLIAFPLTVLIMVCA LVFGPWYGFLYSMGGALLSAASSYGIGHLVGRHTVWRFAGKKIRDLNKRLARRGLMTIIALRIIPLAPFTVVNLVAGASR IRFRDFMLGSSVGLLPGITSISVFTDQLAATIQKPDLPAFAALVAVAAIIIVIAWTCWRWASRRRETMNLSPVTQSD >Mature_717_residues MNGSSILKPGNNCWRIEHAHKAAFIVDGADFFRAFRETVKRARRSVLIMAWDIDSRLKLVRNEEPDGWPTTLGDFLNSLV KRNRNLHVHVLDWDFVMLFAADREWLPLYKQRWNGHRRLHFHLDDHHPTGASHHQKVVVVDDQVAFVGGLDLTLGRWDTT EHAACDERRRDLLTEPIPQPYHDIQMMVSGPIASALGELARERWFLATGQKLSAPRVRRETDYWPDYLAPDVENIEVAIA RTVPEYENQKEVREVERLVLDLIASARHSIYIEAQYFTSHIITDALVRRLEEESGPEIVVLLAEQTVGWLSQYTMDVLRE RSLKRLVTADRYHRLALYEPCIPGLVNECVNVHSKIIIIDNERLRIGSANLNNRSMGLDTECDLMLEANGRENVSRAIAG FRARLLAEHLGMHASIIEERMAREGSLIRTIEALRGHGRTVRPWQFRVAADVDALVPDEDIVDPGKPLDAGLLMGKLIPE GERAPVRSHIGLIVSILISVLALAAAWRWSPLKEWIDVSTLVTLAAEFERAPAAPFITLAIFLLGGLIAFPLTVLIMVCA LVFGPWYGFLYSMGGALLSAASSYGIGHLVGRHTVWRFAGKKIRDLNKRLARRGLMTIIALRIIPLAPFTVVNLVAGASR IRFRDFMLGSSVGLLPGITSISVFTDQLAATIQKPDLPAFAALVAVAAIIIVIAWTCWRWASRRRETMNLSPVTQSD
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TVP38/TMEM64 family [H]
Homologues:
Organism=Escherichia coli, GI87081964, Length=133, Percent_Identity=30.0751879699248, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015414 [H]
Pfam domain/function: PF09335 SNARE_assoc [H]
EC number: NA
Molecular weight: Translated: 80683; Mature: 80683
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGSSILKPGNNCWRIEHAHKAAFIVDGADFFRAFRETVKRARRSVLIMAWDIDSRLKLV CCCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHH RNEEPDGWPTTLGDFLNSLVKRNRNLHVHVLDWDFVMLFAADREWLPLYKQRWNGHRRLH CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCHHHHHHHHCCCCCEEE FHLDDHHPTGASHHQKVVVVDDQVAFVGGLDLTLGRWDTTEHAACDERRRDLLTEPIPQP EEECCCCCCCCCCCCEEEEEECCEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCC YHDIQMMVSGPIASALGELARERWFLATGQKLSAPRVRRETDYWPDYLAPDVENIEVAIA HHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE RTVPEYENQKEVREVERLVLDLIASARHSIYIEAQYFTSHIITDALVRRLEEESGPEIVV ECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEE LLAEQTVGWLSQYTMDVLRERSLKRLVTADRYHRLALYEPCIPGLVNECVNVHSKIIIID EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCEEEEEE NERLRIGSANLNNRSMGLDTECDLMLEANGRENVSRAIAGFRARLLAEHLGMHASIIEER CCEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH MAREGSLIRTIEALRGHGRTVRPWQFRVAADVDALVPDEDIVDPGKPLDAGLLMGKLIPE HHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHCCCC GERAPVRSHIGLIVSILISVLALAAAWRWSPLKEWIDVSTLVTLAAEFERAPAAPFITLA CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IFLLGGLIAFPLTVLIMVCALVFGPWYGFLYSMGGALLSAASSYGIGHLVGRHTVWRFAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KKIRDLNKRLARRGLMTIIALRIIPLAPFTVVNLVAGASRIRFRDFMLGSSVGLLPGITS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHH ISVFTDQLAATIQKPDLPAFAALVAVAAIIIVIAWTCWRWASRRRETMNLSPVTQSD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNGSSILKPGNNCWRIEHAHKAAFIVDGADFFRAFRETVKRARRSVLIMAWDIDSRLKLV CCCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHH RNEEPDGWPTTLGDFLNSLVKRNRNLHVHVLDWDFVMLFAADREWLPLYKQRWNGHRRLH CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCHHHHHHHHCCCCCEEE FHLDDHHPTGASHHQKVVVVDDQVAFVGGLDLTLGRWDTTEHAACDERRRDLLTEPIPQP EEECCCCCCCCCCCCEEEEEECCEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCC YHDIQMMVSGPIASALGELARERWFLATGQKLSAPRVRRETDYWPDYLAPDVENIEVAIA HHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE RTVPEYENQKEVREVERLVLDLIASARHSIYIEAQYFTSHIITDALVRRLEEESGPEIVV ECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEE LLAEQTVGWLSQYTMDVLRERSLKRLVTADRYHRLALYEPCIPGLVNECVNVHSKIIIID EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCEEEEEE NERLRIGSANLNNRSMGLDTECDLMLEANGRENVSRAIAGFRARLLAEHLGMHASIIEER CCEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH MAREGSLIRTIEALRGHGRTVRPWQFRVAADVDALVPDEDIVDPGKPLDAGLLMGKLIPE HHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHCCCC GERAPVRSHIGLIVSILISVLALAAAWRWSPLKEWIDVSTLVTLAAEFERAPAAPFITLA CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IFLLGGLIAFPLTVLIMVCALVFGPWYGFLYSMGGALLSAASSYGIGHLVGRHTVWRFAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KKIRDLNKRLARRGLMTIIALRIIPLAPFTVVNLVAGASRIRFRDFMLGSSVGLLPGITS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHH ISVFTDQLAATIQKPDLPAFAALVAVAAIIIVIAWTCWRWASRRRETMNLSPVTQSD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]