| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is luxQ [H]
Identifier: 82702620
GI number: 82702620
Start: 1703711
End: 1705801
Strand: Direct
Name: luxQ [H]
Synonym: Nmul_A1491
Alternate gene names: 82702620
Gene position: 1703711-1705801 (Clockwise)
Preceding gene: 82702615
Following gene: 82702621
Centisome position: 53.5
GC content: 52.61
Gene sequence:
>2091_bases ATGGATAATAATGATGAAAGCCTGCCGCCCTCGGTTACCTTGCATACAAACGCCGTACTTCACGCCGGGCAACAGGTCGA GCATGAGCTTCAGCGGGTCAAAAGGGCCCTTGAGGATAAAACGAAACAGCTTGATGAGTCACTATCTATCCTGCGAGCAA CCATAGAATCCACTGCCGACGGAATACTGGTTACCGACGAGTATGGCCATATGCTTCGCTACAACGAACGATATCTGCAG ATGTGGCAGATTAAGCTCCCCGATATCGTTGAATTGCATCAACATAGGCAATTGCAGAAACTTAGTTGCAAGTACTTGGC GGACCCGAAGCAATATCTTGAGAGAATAGAGGAAATATATGATGCCTGGCCGCCCGAAACATACGACTTGCTGGAACTTA CCGATGGCCGGATATTTGAACGGTATTCGAAGATTCAGTATGCAGAGGACCTGTGTGTAGGCCGCGTATGGAGCTTTAGA GATATCACGGCCCGTAAACATGCCGAAGAGGCGCTGCAGGAAAGCACCGAGCGTCTCCACTTCATGGCTGAGGCCATGCC GCAGAAAATATTCACTGCGCGCGCCGATGGGGCCGTGGATTATTTCAATCAGCAATGGAAAGATTACACCGGTCTTGCCC GCGAGAAAATGCAGGGTTGGGAATGGATCAAGCTCATCCATCCTGACGACGCCCCGGAGTGCGTGCGGCGCTGGCAGCAC TCGCTTAACACAGGGGAGCATCTGCAGATGGAGTGCCGTTTCCGCCAAGCGAACGGCACTTACCGCTGGCACCTGCTTCA GGCACAGGCGCGGCGCGATACGAAAGGGTATATATCCATGTGGGTCGGTTCGAACACGGATATCGACACGCTAAAACGCG CAGACGAAGAGAAAAAACAGCTCCTTGAGAATGAACGGATTGCGCGAAGCGAAGCCGAACGCGCGAACCGCATCAAGGAT GATTTCCTGGCAACCCTATCCCATGAACTTAGAACACCGCTTAATGCCATCCTTGGATGGTCACAGCTCATCTTGCAGGG GACAATGAAAAACGAAGACATTCAAAGGGGTCTGGAAACCATCGAGCGAAACGCCCGGGCACAGAATAAGCTTATCGAAG ATCTTCTGGAAATGAGCAGCATCATTTCTAACAAAATCCGATTGGATATGCAGGAATGGGACCTTGGCGCAATAGCCGAG GCAGCAGTCGAATCTGTTGCACCTGCAGCCGAGGCTAAAGGAATATGTATCCGAAGAACAATCGATGCCACTGCAGGACG GGTTCTAGGGGATAACCATCGCCTTCAGCAGATAATATGGAACCTTCTTTCCAATGCCGTCAAGTTTACGCCTGACGGCG GTACCGTAGAGGTAATCGTGGAACGCGCCGCATCGCAGCTTAGGGTCATCGTAAAAGATTCCGGGGTGGGTATCAAACCT GAATTCCTGGCGTATGTTTTTGACCGCTTCCGGCAAGCCGACTCTTCCCTCACCCGGAATCATGGCGGCCTGGGCTTGGG ACTTGCCATCGTGAAGCAGCTTGTGGGGCTGCATGGTGGAACGGTTTGCGCAGAGAGCAAGGGGGAAGGTCAGGGCGCCT CATTTTGCGTTACCTTACCGCCTGCCCCGATCAAGGACGGCATGGACAGACAACTGCTGCCTGATGCCAAACCTTCCCAG AAGGATGGCAATATCCTTCTCTCAGGGATGAGGATTCTCGTCATTGATGACGAACGGGACTCGCGTGAGCTCATCCATAA AGTGCTCGCGCAGCACCGGGTTGAAGTCATTACCGCGGCAAACGCCATGGAAGGACTGTTGATACTGAAAAGCCAGATGC CGGATGTAATGATCAGTGATATTGGCATGCCGGGAAAAGACGGCTACCAGTTTATTCGCGAAGTGAGAAGACTTCCTGCA ATCCAGGGAGGAGAGATACCGGCAATCGCACTGAGCGCATTTGCGCATCCGGAAGACCGTACCTGCGCAATGATGGCGGG TTACCAGATGCATCTCTCCAAACCCGTGGAATCAAAAGAACTGATCGCTTCCATCGGAAGCCTGATGGCGCGAGCAAAAA CAGCGAGTTGA
Upstream 100 bases:
>100_bases CTCTTGAACAGATCAGTTTACACGCATGCCTGCTGCCGGTGATTACCGCTTTAAGCCACCCTGGTTTGGACAAACTTCAT AAAGGGGAATAAAACAGCAA
Downstream 100 bases:
>100_bases CGCGGAAGGAACGTGACACTGGGTTAATACTCCGGCCAACTCCGATTGCATCGCACGATGGTCTCTATAATATTGCCACG TTTACCCGCTTAACGTGGTA
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 696; Mature: 696
Protein sequence:
>696_residues MDNNDESLPPSVTLHTNAVLHAGQQVEHELQRVKRALEDKTKQLDESLSILRATIESTADGILVTDEYGHMLRYNERYLQ MWQIKLPDIVELHQHRQLQKLSCKYLADPKQYLERIEEIYDAWPPETYDLLELTDGRIFERYSKIQYAEDLCVGRVWSFR DITARKHAEEALQESTERLHFMAEAMPQKIFTARADGAVDYFNQQWKDYTGLAREKMQGWEWIKLIHPDDAPECVRRWQH SLNTGEHLQMECRFRQANGTYRWHLLQAQARRDTKGYISMWVGSNTDIDTLKRADEEKKQLLENERIARSEAERANRIKD DFLATLSHELRTPLNAILGWSQLILQGTMKNEDIQRGLETIERNARAQNKLIEDLLEMSSIISNKIRLDMQEWDLGAIAE AAVESVAPAAEAKGICIRRTIDATAGRVLGDNHRLQQIIWNLLSNAVKFTPDGGTVEVIVERAASQLRVIVKDSGVGIKP EFLAYVFDRFRQADSSLTRNHGGLGLGLAIVKQLVGLHGGTVCAESKGEGQGASFCVTLPPAPIKDGMDRQLLPDAKPSQ KDGNILLSGMRILVIDDERDSRELIHKVLAQHRVEVITAANAMEGLLILKSQMPDVMISDIGMPGKDGYQFIREVRRLPA IQGGEIPAIALSAFAHPEDRTCAMMAGYQMHLSKPVESKELIASIGSLMARAKTAS
Sequences:
>Translated_696_residues MDNNDESLPPSVTLHTNAVLHAGQQVEHELQRVKRALEDKTKQLDESLSILRATIESTADGILVTDEYGHMLRYNERYLQ MWQIKLPDIVELHQHRQLQKLSCKYLADPKQYLERIEEIYDAWPPETYDLLELTDGRIFERYSKIQYAEDLCVGRVWSFR DITARKHAEEALQESTERLHFMAEAMPQKIFTARADGAVDYFNQQWKDYTGLAREKMQGWEWIKLIHPDDAPECVRRWQH SLNTGEHLQMECRFRQANGTYRWHLLQAQARRDTKGYISMWVGSNTDIDTLKRADEEKKQLLENERIARSEAERANRIKD DFLATLSHELRTPLNAILGWSQLILQGTMKNEDIQRGLETIERNARAQNKLIEDLLEMSSIISNKIRLDMQEWDLGAIAE AAVESVAPAAEAKGICIRRTIDATAGRVLGDNHRLQQIIWNLLSNAVKFTPDGGTVEVIVERAASQLRVIVKDSGVGIKP EFLAYVFDRFRQADSSLTRNHGGLGLGLAIVKQLVGLHGGTVCAESKGEGQGASFCVTLPPAPIKDGMDRQLLPDAKPSQ KDGNILLSGMRILVIDDERDSRELIHKVLAQHRVEVITAANAMEGLLILKSQMPDVMISDIGMPGKDGYQFIREVRRLPA IQGGEIPAIALSAFAHPEDRTCAMMAGYQMHLSKPVESKELIASIGSLMARAKTAS >Mature_696_residues MDNNDESLPPSVTLHTNAVLHAGQQVEHELQRVKRALEDKTKQLDESLSILRATIESTADGILVTDEYGHMLRYNERYLQ MWQIKLPDIVELHQHRQLQKLSCKYLADPKQYLERIEEIYDAWPPETYDLLELTDGRIFERYSKIQYAEDLCVGRVWSFR DITARKHAEEALQESTERLHFMAEAMPQKIFTARADGAVDYFNQQWKDYTGLAREKMQGWEWIKLIHPDDAPECVRRWQH SLNTGEHLQMECRFRQANGTYRWHLLQAQARRDTKGYISMWVGSNTDIDTLKRADEEKKQLLENERIARSEAERANRIKD DFLATLSHELRTPLNAILGWSQLILQGTMKNEDIQRGLETIERNARAQNKLIEDLLEMSSIISNKIRLDMQEWDLGAIAE AAVESVAPAAEAKGICIRRTIDATAGRVLGDNHRLQQIIWNLLSNAVKFTPDGGTVEVIVERAASQLRVIVKDSGVGIKP EFLAYVFDRFRQADSSLTRNHGGLGLGLAIVKQLVGLHGGTVCAESKGEGQGASFCVTLPPAPIKDGMDRQLLPDAKPSQ KDGNILLSGMRILVIDDERDSRELIHKVLAQHRVEVITAANAMEGLLILKSQMPDVMISDIGMPGKDGYQFIREVRRLPA IQGGEIPAIALSAFAHPEDRTCAMMAGYQMHLSKPVESKELIASIGSLMARAKTAS
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=258, Percent_Identity=37.2093023255814, Blast_Score=151, Evalue=2e-37, Organism=Escherichia coli, GI48994928, Length=530, Percent_Identity=26.0377358490566, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1788713, Length=590, Percent_Identity=24.9152542372881, Blast_Score=137, Evalue=3e-33, Organism=Escherichia coli, GI87081816, Length=409, Percent_Identity=29.5843520782396, Blast_Score=135, Evalue=7e-33, Organism=Escherichia coli, GI145693157, Length=261, Percent_Identity=34.4827586206897, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1786783, Length=249, Percent_Identity=30.9236947791165, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1788393, Length=275, Percent_Identity=28.7272727272727, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=30.7359307359307, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=29.3877551020408, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1790436, Length=217, Percent_Identity=28.110599078341, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI1788549, Length=376, Percent_Identity=24.2021276595745, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788279, Length=230, Percent_Identity=28.2608695652174, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790861, Length=234, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790346, Length=234, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1787894, Length=242, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1789403, Length=231, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1786599, Length=121, Percent_Identity=33.0578512396694, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786911, Length=124, Percent_Identity=33.8709677419355, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI87082128, Length=242, Percent_Identity=25.2066115702479, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=143, Percent_Identity=32.1678321678322, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 78695; Mature: 78695
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNDESLPPSVTLHTNAVLHAGQQVEHELQRVKRALEDKTKQLDESLSILRATIESTAD CCCCCCCCCCCEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GILVTDEYGHMLRYNERYLQMWQIKLPDIVELHQHRQLQKLSCKYLADPKQYLERIEEIY CEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DAWPPETYDLLELTDGRIFERYSKIQYAEDLCVGRVWSFRDITARKHAEEALQESTERLH HCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FMAEAMPQKIFTARADGAVDYFNQQWKDYTGLAREKMQGWEWIKLIHPDDAPECVRRWQH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH SLNTGEHLQMECRFRQANGTYRWHLLQAQARRDTKGYISMWVGSNTDIDTLKRADEEKKQ HCCCCCEEEEEEEEEECCCEEEEEEEEHHHCCCCCCEEEEEECCCCCHHHHHHCCHHHHH LLENERIARSEAERANRIKDDFLATLSHELRTPLNAILGWSQLILQGTMKNEDIQRGLET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IERNARAQNKLIEDLLEMSSIISNKIRLDMQEWDLGAIAEAAVESVAPAAEAKGICIRRT HHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHCCHHHHHHHHHHHHCCHHHHCCEEEEEE IDATAGRVLGDNHRLQQIIWNLLSNAVKFTPDGGTVEVIVERAASQLRVIVKDSGVGIKP HHHHCCCCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCH EFLAYVFDRFRQADSSLTRNHGGLGLGLAIVKQLVGLHGGTVCAESKGEGQGASFCVTLP HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECC PAPIKDGMDRQLLPDAKPSQKDGNILLSGMRILVIDDERDSRELIHKVLAQHRVEVITAA CCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH NAMEGLLILKSQMPDVMISDIGMPGKDGYQFIREVRRLPAIQGGEIPAIALSAFAHPEDR HHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC TCAMMAGYQMHLSKPVESKELIASIGSLMARAKTAS CCHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDNNDESLPPSVTLHTNAVLHAGQQVEHELQRVKRALEDKTKQLDESLSILRATIESTAD CCCCCCCCCCCEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GILVTDEYGHMLRYNERYLQMWQIKLPDIVELHQHRQLQKLSCKYLADPKQYLERIEEIY CEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DAWPPETYDLLELTDGRIFERYSKIQYAEDLCVGRVWSFRDITARKHAEEALQESTERLH HCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FMAEAMPQKIFTARADGAVDYFNQQWKDYTGLAREKMQGWEWIKLIHPDDAPECVRRWQH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH SLNTGEHLQMECRFRQANGTYRWHLLQAQARRDTKGYISMWVGSNTDIDTLKRADEEKKQ HCCCCCEEEEEEEEEECCCEEEEEEEEHHHCCCCCCEEEEEECCCCCHHHHHHCCHHHHH LLENERIARSEAERANRIKDDFLATLSHELRTPLNAILGWSQLILQGTMKNEDIQRGLET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IERNARAQNKLIEDLLEMSSIISNKIRLDMQEWDLGAIAEAAVESVAPAAEAKGICIRRT HHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHCCHHHHHHHHHHHHCCHHHHCCEEEEEE IDATAGRVLGDNHRLQQIIWNLLSNAVKFTPDGGTVEVIVERAASQLRVIVKDSGVGIKP HHHHCCCCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCH EFLAYVFDRFRQADSSLTRNHGGLGLGLAIVKQLVGLHGGTVCAESKGEGQGASFCVTLP HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECC PAPIKDGMDRQLLPDAKPSQKDGNILLSGMRILVIDDERDSRELIHKVLAQHRVEVITAA CCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH NAMEGLLILKSQMPDVMISDIGMPGKDGYQFIREVRRLPAIQGGEIPAIALSAFAHPEDR HHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC TCAMMAGYQMHLSKPVESKELIASIGSLMARAKTAS CCHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]