Click here to switch to the map view.

The map label for this gene is ybhS [H]

Identifier: 82702549

GI number: 82702549

Start: 1630361

End: 1631524

Strand: Reverse

Name: ybhS [H]

Synonym: Nmul_A1420

Alternate gene names: 82702549

Gene position: 1631524-1630361 (Counterclockwise)

Preceding gene: 82702550

Following gene: 82702548

Centisome position: 51.24

GC content: 53.01

Gene sequence:

>1164_bases
ATGAGGGGAAAAAACAGCCAATCAGGTCAACGGAATTATCTCGGCTTTCAACTACGTCTCATTTCCCTGATTCGAAAGGA
AATACGCCAACTGTTGCGAGACAAAAGCAATCTCGCGGTTGGAATTGGTCTCCCCATTATATTGATCCTCATTTTCGGTT
ACGGCTTGTCCCTCGATGTCAGGAATGCGCCCGTTGCAATCGTACTGGAAGATGCCTCCCCCACTGCGGTGGACGTTGTC
TCAGGCCTGGAACTTTCTCCGTATATTTCACCTGTAAGAGTTCCATCCATGCAGGAGGCAGAGCGTTTGATGCTGGCGCG
AGAAATAGAGGGGATCTTCCGGATACCAAGCGATTTTTCCCGACGATTGGGAGAAGGCGAAGCACAAGTCCAGTTTCTGG
CCTATGGAACAGATTCCACTCGCGCAACAATCATTCGAAGCTACATCAACAGTATTGTTGGCCAGTGGACGTTGCGGCAG
GCTGACCGAAAAGCGGCTTCATCGGTCCCGGCCGAGGGTAGAATCACGCTGGTGGAACGCTTGTGGTTCAACTCCGCCAA
CTCCAGTACATGGTATCTGGTGCCAGGCTTGATCGTTCTGATCATGACCCTCATCGGGGCCTTTCTCACCGCGATGGTGA
TGGCGCGCGAGTGGGAACGCGGTACGCTGGAAGCATTGTTCGTCTCGCCCGTGCGCCCCACGGAAATCCTGCTGGCGAAA
ATTGTCCCCTATTTTCTGGTTGGCATGGCGGGTCTCGGGTTATGCCTGGCCGCAGCGCATTTTCTGTTCGAGGTGCCCAT
GCGCGGCTCCCTGCTAATCCTGCTGGGCGGCTCGATGCTCTATCTATTGGTGGCGCTGGGTTTCGGCCTGGTCATCTCGT
CCATTACCAAAAACCAGTTCACTGCCAGTCAAATCGCAATTATTACCAGCTTCATGCCCGCCCTCATGCTTTCCGGCTTT
CTTTTTGACTTGCGCAACGTGCCTGTTGTCATTCAGCTGGTTGGAAAGATTCTACCGGCCACTTATTTCATGGAATTGAT
CCGGACGCTGTATCTCGCCGGCAATGTATGGCCGGTGATAATAGAGAATTATGCGATTCTCACAAGCTATGCAGTGCTGT
TGCTGGGTCTTGCGCGCTTCGTCACCCGCAAGAAACTGGATTGA

Upstream 100 bases:

>100_bases
CCGGGGGGAAGGATGCTACGCTGACAATGGAAGAGGCATTCATTCGTATCGTCGCCCGCGAGCGGGAACGAGATAAATCG
GCTGAAAGAGCGTTGAGCTT

Downstream 100 bases:

>100_bases
CCTCATGCTTGACCTCGCGCGCCGCATTATCAGCCTGTGTCGCAAGGAGTTTCTGGCAATCCTGAAAGATCCGGCCAATC
GGGTCATTCTTGTCGTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MRGKNSQSGQRNYLGFQLRLISLIRKEIRQLLRDKSNLAVGIGLPIILILIFGYGLSLDVRNAPVAIVLEDASPTAVDVV
SGLELSPYISPVRVPSMQEAERLMLAREIEGIFRIPSDFSRRLGEGEAQVQFLAYGTDSTRATIIRSYINSIVGQWTLRQ
ADRKAASSVPAEGRITLVERLWFNSANSSTWYLVPGLIVLIMTLIGAFLTAMVMAREWERGTLEALFVSPVRPTEILLAK
IVPYFLVGMAGLGLCLAAAHFLFEVPMRGSLLILLGGSMLYLLVALGFGLVISSITKNQFTASQIAIITSFMPALMLSGF
LFDLRNVPVVIQLVGKILPATYFMELIRTLYLAGNVWPVIIENYAILTSYAVLLLGLARFVTRKKLD

Sequences:

>Translated_387_residues
MRGKNSQSGQRNYLGFQLRLISLIRKEIRQLLRDKSNLAVGIGLPIILILIFGYGLSLDVRNAPVAIVLEDASPTAVDVV
SGLELSPYISPVRVPSMQEAERLMLAREIEGIFRIPSDFSRRLGEGEAQVQFLAYGTDSTRATIIRSYINSIVGQWTLRQ
ADRKAASSVPAEGRITLVERLWFNSANSSTWYLVPGLIVLIMTLIGAFLTAMVMAREWERGTLEALFVSPVRPTEILLAK
IVPYFLVGMAGLGLCLAAAHFLFEVPMRGSLLILLGGSMLYLLVALGFGLVISSITKNQFTASQIAIITSFMPALMLSGF
LFDLRNVPVVIQLVGKILPATYFMELIRTLYLAGNVWPVIIENYAILTSYAVLLLGLARFVTRKKLD
>Mature_387_residues
MRGKNSQSGQRNYLGFQLRLISLIRKEIRQLLRDKSNLAVGIGLPIILILIFGYGLSLDVRNAPVAIVLEDASPTAVDVV
SGLELSPYISPVRVPSMQEAERLMLAREIEGIFRIPSDFSRRLGEGEAQVQFLAYGTDSTRATIIRSYINSIVGQWTLRQ
ADRKAASSVPAEGRITLVERLWFNSANSSTWYLVPGLIVLIMTLIGAFLTAMVMAREWERGTLEALFVSPVRPTEILLAK
IVPYFLVGMAGLGLCLAAAHFLFEVPMRGSLLILLGGSMLYLLVALGFGLVISSITKNQFTASQIAIITSFMPALMLSGF
LFDLRNVPVVIQLVGKILPATYFMELIRTLYLAGNVWPVIIENYAILTSYAVLLLGLARFVTRKKLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=371, Percent_Identity=39.8921832884097, Blast_Score=275, Evalue=4e-75,
Organism=Escherichia coli, GI1787010, Length=353, Percent_Identity=30.8781869688385, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI48994943, Length=342, Percent_Identity=30.4093567251462, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI226510979, Length=371, Percent_Identity=26.1455525606469, Blast_Score=80, Evalue=3e-16,
Organism=Drosophila melanogaster, GI85725260, Length=402, Percent_Identity=22.8855721393035, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI85725262, Length=392, Percent_Identity=22.9591836734694, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24650853, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24650855, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42714; Mature: 42714

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKNSQSGQRNYLGFQLRLISLIRKEIRQLLRDKSNLAVGIGLPIILILIFGYGLSLDV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCEEEE
RNAPVAIVLEDASPTAVDVVSGLELSPYISPVRVPSMQEAERLMLAREIEGIFRIPSDFS
CCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
RRLGEGEAQVQFLAYGTDSTRATIIRSYINSIVGQWTLRQADRKAASSVPAEGRITLVER
HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LWFNSANSSTWYLVPGLIVLIMTLIGAFLTAMVMAREWERGTLEALFVSPVRPTEILLAK
HHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH
IVPYFLVGMAGLGLCLAAAHFLFEVPMRGSLLILLGGSMLYLLVALGFGLVISSITKNQF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCH
TASQIAIITSFMPALMLSGFLFDLRNVPVVIQLVGKILPATYFMELIRTLYLAGNVWPVI
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IENYAILTSYAVLLLGLARFVTRKKLD
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRGKNSQSGQRNYLGFQLRLISLIRKEIRQLLRDKSNLAVGIGLPIILILIFGYGLSLDV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCEEEE
RNAPVAIVLEDASPTAVDVVSGLELSPYISPVRVPSMQEAERLMLAREIEGIFRIPSDFS
CCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
RRLGEGEAQVQFLAYGTDSTRATIIRSYINSIVGQWTLRQADRKAASSVPAEGRITLVER
HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LWFNSANSSTWYLVPGLIVLIMTLIGAFLTAMVMAREWERGTLEALFVSPVRPTEILLAK
HHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH
IVPYFLVGMAGLGLCLAAAHFLFEVPMRGSLLILLGGSMLYLLVALGFGLVISSITKNQF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCH
TASQIAIITSFMPALMLSGFLFDLRNVPVVIQLVGKILPATYFMELIRTLYLAGNVWPVI
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IENYAILTSYAVLLLGLARFVTRKKLD
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]