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The map label for this gene is ybhR [H]

Identifier: 82702548

GI number: 82702548

Start: 1629247

End: 1630356

Strand: Reverse

Name: ybhR [H]

Synonym: Nmul_A1419

Alternate gene names: 82702548

Gene position: 1630356-1629247 (Counterclockwise)

Preceding gene: 82702549

Following gene: 82702547

Centisome position: 51.2

GC content: 55.14

Gene sequence:

>1110_bases
ATGCTTGACCTCGCGCGCCGCATTATCAGCCTGTGTCGCAAGGAGTTTCTGGCAATCCTGAAAGATCCGGCCAATCGGGT
CATTCTTGTCGTCCCGTCGCTGGTGGAAAGCTTTTTATTCGGCTACGCTGCCACTTTTGATCTCATCAACGTGCCCTATG
CCTTGCTTGATCAGAGCCGCGGTGCTACCTCCGTTGAATTGATAGCGCGTCTGGATGGAACCGGTGTTTTCAAGCGGGTC
GCAACCTTGCAAACACAGCGGGATATCGCGGGAGTGATCGATTCGCAGCAGGCCCTGATGGTGATACAGATCGGGCCGCG
CTTCGAGCAGCAAGTGAATGCGGGCGAGCCTGCCCCGGTACAATTGATTCTCGATGCACGCAACTCCAACAGTGCCAGCT
CTGCCGCGGGGTATGTCGCTTCAATCATCGAATCCTATAATGCGACGTTAGGTGGCAACGCGAGACAGCCCCTTAAGGTT
GAGGCACGCGCCTGGTACAACCCCAATCTGGAAACCCGCTGGAATCTGATGCCGGGCTTGATCGCCTCGCTCAGCATGAT
ACAGACAATGTTGCTGGCTGCGCTCACCGTGGCCCGCGAGCGCGAGAACGGTACGTTCGATCAGTTACTGGTGACGCCGT
TTTCACCCATGGAAATCATGGCGGGCAAGGTGATTCCAATCGTTACAATAGGTCTGCTGCAATCCACTATCGTTCTCCTG
GTGTCGCTCTACTGGTTCGAGGTGCCGCTTGCCGGTTCGCTGGTAACACTCTATACCGGTTTGGCATTGTTCATCATTGC
CAGTGTAGGGCTGGGTCTGGCGATTTCAGCGGTTTGTACCACTATGCAGCAGGCCATGCTCTATACTTTCATGCTGGTGA
TGCCGCTCATAATGCTTTCAGGCTTGGCGACGCCAGTGCGCAACATGCCGGAATTTATTCAGACTATTACTCTGGCTAAT
CCCCTCCGTTTTGCTATTGACCTGATGCAGCGCGTGTATCTGGAGGGGGCTGACTTGTCGATGGTCGGCTATGACCTGAT
TCCGCTCCTGATCATGGCGGCTGTTATGCTGCCTTTCGCCGCATGGCTGTTTCGGAACCGGCTGTTGTGA

Upstream 100 bases:

>100_bases
TGGCCGGTGATAATAGAGAATTATGCGATTCTCACAAGCTATGCAGTGCTGTTGCTGGGTCTTGCGCGCTTCGTCACCCG
CAAGAAACTGGATTGACCTC

Downstream 100 bases:

>100_bases
CCCGAGATCAGGAAGCTGCAGGCACTGCAAGCAGAACATTTTTTCCCCTTCGAGTATGGTCTCCGCCCTTCCGGTGTGCA
TTGTTCTGGGAAGGTTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MLDLARRIISLCRKEFLAILKDPANRVILVVPSLVESFLFGYAATFDLINVPYALLDQSRGATSVELIARLDGTGVFKRV
ATLQTQRDIAGVIDSQQALMVIQIGPRFEQQVNAGEPAPVQLILDARNSNSASSAAGYVASIIESYNATLGGNARQPLKV
EARAWYNPNLETRWNLMPGLIASLSMIQTMLLAALTVARERENGTFDQLLVTPFSPMEIMAGKVIPIVTIGLLQSTIVLL
VSLYWFEVPLAGSLVTLYTGLALFIIASVGLGLAISAVCTTMQQAMLYTFMLVMPLIMLSGLATPVRNMPEFIQTITLAN
PLRFAIDLMQRVYLEGADLSMVGYDLIPLLIMAAVMLPFAAWLFRNRLL

Sequences:

>Translated_369_residues
MLDLARRIISLCRKEFLAILKDPANRVILVVPSLVESFLFGYAATFDLINVPYALLDQSRGATSVELIARLDGTGVFKRV
ATLQTQRDIAGVIDSQQALMVIQIGPRFEQQVNAGEPAPVQLILDARNSNSASSAAGYVASIIESYNATLGGNARQPLKV
EARAWYNPNLETRWNLMPGLIASLSMIQTMLLAALTVARERENGTFDQLLVTPFSPMEIMAGKVIPIVTIGLLQSTIVLL
VSLYWFEVPLAGSLVTLYTGLALFIIASVGLGLAISAVCTTMQQAMLYTFMLVMPLIMLSGLATPVRNMPEFIQTITLAN
PLRFAIDLMQRVYLEGADLSMVGYDLIPLLIMAAVMLPFAAWLFRNRLL
>Mature_369_residues
MLDLARRIISLCRKEFLAILKDPANRVILVVPSLVESFLFGYAATFDLINVPYALLDQSRGATSVELIARLDGTGVFKRV
ATLQTQRDIAGVIDSQQALMVIQIGPRFEQQVNAGEPAPVQLILDARNSNSASSAAGYVASIIESYNATLGGNARQPLKV
EARAWYNPNLETRWNLMPGLIASLSMIQTMLLAALTVARERENGTFDQLLVTPFSPMEIMAGKVIPIVTIGLLQSTIVLL
VSLYWFEVPLAGSLVTLYTGLALFIIASVGLGLAISAVCTTMQQAMLYTFMLVMPLIMLSGLATPVRNMPEFIQTITLAN
PLRFAIDLMQRVYLEGADLSMVGYDLIPLLIMAAVMLPFAAWLFRNRLL

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=366, Percent_Identity=39.0710382513661, Blast_Score=290, Evalue=7e-80,
Organism=Escherichia coli, GI1787011, Length=373, Percent_Identity=30.5630026809651, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI48994943, Length=369, Percent_Identity=25.2032520325203, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI226510979, Length=376, Percent_Identity=28.7234042553192, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40372; Mature: 40372

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLARRIISLCRKEFLAILKDPANRVILVVPSLVESFLFGYAATFDLINVPYALLDQSR
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
GATSVELIARLDGTGVFKRVATLQTQRDIAGVIDSQQALMVIQIGPRFEQQVNAGEPAPV
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCCE
QLILDARNSNSASSAAGYVASIIESYNATLGGNARQPLKVEARAWYNPNLETRWNLMPGL
EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
IASLSMIQTMLLAALTVARERENGTFDQLLVTPFSPMEIMAGKVIPIVTIGLLQSTIVLL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHH
VSLYWFEVPLAGSLVTLYTGLALFIIASVGLGLAISAVCTTMQQAMLYTFMLVMPLIMLS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLATPVRNMPEFIQTITLANPLRFAIDLMQRVYLEGADLSMVGYDLIPLLIMAAVMLPFA
HCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AWLFRNRLL
HHHHHHCCC
>Mature Secondary Structure
MLDLARRIISLCRKEFLAILKDPANRVILVVPSLVESFLFGYAATFDLINVPYALLDQSR
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
GATSVELIARLDGTGVFKRVATLQTQRDIAGVIDSQQALMVIQIGPRFEQQVNAGEPAPV
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCCE
QLILDARNSNSASSAAGYVASIIESYNATLGGNARQPLKVEARAWYNPNLETRWNLMPGL
EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
IASLSMIQTMLLAALTVARERENGTFDQLLVTPFSPMEIMAGKVIPIVTIGLLQSTIVLL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHH
VSLYWFEVPLAGSLVTLYTGLALFIIASVGLGLAISAVCTTMQQAMLYTFMLVMPLIMLS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLATPVRNMPEFIQTITLANPLRFAIDLMQRVYLEGADLSMVGYDLIPLLIMAAVMLPFA
HCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AWLFRNRLL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]