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The map label for this gene is ybcL [C]

Identifier: 82702300

GI number: 82702300

Start: 1348856

End: 1349329

Strand: Direct

Name: ybcL [C]

Synonym: Nmul_A1171

Alternate gene names: 82702300

Gene position: 1348856-1349329 (Clockwise)

Preceding gene: 82702299

Following gene: 82702301

Centisome position: 42.36

GC content: 53.38

Gene sequence:

>474_bases
ATGTCTATGGCAATAACATCTTCATCCTTTGCGAATCACGGGGAGATTCCTATTCGTCATACCTGCCAGGGACATGATAC
TTCACCCGAGCTGTTCTGGGAAAATATACCGGAAAATGCGAAAAGCCTGGTTTTGATTGTGGACGATCCGGATGCGCCCG
ATCCTGCCGCTCCCAAGCTGACCTGGGTACACTGGGTGCTATATAACATTCCTCCTGCCGCTCAAGGTTTACCCGAGGGT
GTGGCGGAAGCCGATCTTCCCATTGGAACACTCGGCGGGCTCAATGACTGGCAGCGCACAGGGTATGGCGGGCCCTGCCC
CCCTATCGGGAAGCATCGATACTTTCATAAACTCTACGCGCTGGATATCATGCTTCCGGATCTGAAACATCCCACCAAGG
CAATCCTCGAACAGGAGATGCAGGGCCATGTGATCGCGCAATCGGAACTCGTGGGGCTATATCAGAAGCAATAG

Upstream 100 bases:

>100_bases
TGTAATGACCACTATGCTGGCAGCTTCGATCTCCGTAGCGGCTGAGCCCGACATTCCCTTGAGCCAGAAGGAAAGAAAAC
CAAAGAAGGAGGCGTCTCGC

Downstream 100 bases:

>100_bases
CTGCTATTGCTTTTTTTCTTTTTTAGGTTCCGGTTCATCCAGCGCGGCTATGTACACTCAAGGGGATAAACGCGCAATAT
GGCATGGGTCGCATCAAGAA

Product: YbhB and YbcL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSMAITSSSFANHGEIPIRHTCQGHDTSPELFWENIPENAKSLVLIVDDPDAPDPAAPKLTWVHWVLYNIPPAAQGLPEG
VAEADLPIGTLGGLNDWQRTGYGGPCPPIGKHRYFHKLYALDIMLPDLKHPTKAILEQEMQGHVIAQSELVGLYQKQ

Sequences:

>Translated_157_residues
MSMAITSSSFANHGEIPIRHTCQGHDTSPELFWENIPENAKSLVLIVDDPDAPDPAAPKLTWVHWVLYNIPPAAQGLPEG
VAEADLPIGTLGGLNDWQRTGYGGPCPPIGKHRYFHKLYALDIMLPDLKHPTKAILEQEMQGHVIAQSELVGLYQKQ
>Mature_156_residues
SMAITSSSFANHGEIPIRHTCQGHDTSPELFWENIPENAKSLVLIVDDPDAPDPAAPKLTWVHWVLYNIPPAAQGLPEGV
AEADLPIGTLGGLNDWQRTGYGGPCPPIGKHRYFHKLYALDIMLPDLKHPTKAILEQEMQGHVIAQSELVGLYQKQ

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=140, Percent_Identity=35.7142857142857, Blast_Score=90, Evalue=7e-20,
Organism=Escherichia coli, GI1786990, Length=162, Percent_Identity=30.8641975308642, Blast_Score=84, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 17294; Mature: 17163

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMAITSSSFANHGEIPIRHTCQGHDTSPELFWENIPENAKSLVLIVDDPDAPDPAAPKL
CCEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
TWVHWVLYNIPPAAQGLPEGVAEADLPIGTLGGLNDWQRTGYGGPCPPIGKHRYFHKLYA
EEEEEEEECCCCHHCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
LDIMLPDLKHPTKAILEQEMQGHVIAQSELVGLYQKQ
HHHCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCC
>Mature Secondary Structure 
SMAITSSSFANHGEIPIRHTCQGHDTSPELFWENIPENAKSLVLIVDDPDAPDPAAPKL
CEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
TWVHWVLYNIPPAAQGLPEGVAEADLPIGTLGGLNDWQRTGYGGPCPPIGKHRYFHKLYA
EEEEEEEECCCCHHCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
LDIMLPDLKHPTKAILEQEMQGHVIAQSELVGLYQKQ
HHHCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]