| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is dsbB
Identifier: 82702162
GI number: 82702162
Start: 1194611
End: 1195117
Strand: Direct
Name: dsbB
Synonym: Nmul_A1033
Alternate gene names: 82702162
Gene position: 1194611-1195117 (Clockwise)
Preceding gene: 82702161
Following gene: 82702163
Centisome position: 37.52
GC content: 56.61
Gene sequence:
>507_bases ATGAGTAACCCCATGAGGCCGGTACGAAGCATATTGCTGGCGATCTTCACCGGTTGCGCGGGCCTGATCGGCTACGCGCT TTATCTGCAACTCGTGGAAAATCTTTTGCCATGCCCGCTTTGTGTCGTGCAGCGTATGGCCTACTGGCTGATAGGCTTGA CCGCGCTGGCCGGTTTTTTTCATACTCCGGAAACGACCGGTCGCCGCATCTATGCCGGCCTGATGGCAGTCTTTGCGTTC ACCGGCGGGCTGGTTGCCTTGCGTCAGGCTTGGCTCGTCCGCTACCCGGAAGCATTCGAATGCGGTATCAGCCCTGAAGA AGCGTTTCTGAACGCGCTGCCGCTGGCACGATGGTGGCCCGTCATGTTCGAAGCAAACGGCGATTGCGCCGATGTCACAT GGAAATTTGCTTCGCTTACTCTTCCGGATTGGTCCGCAATTTTTTTCATGATCCTTGCCGCGCTCTCGATTTATGTCCTG CTCGTCCGCGAAAATCAGCGCGAGTGA
Upstream 100 bases:
>100_bases CTGGAGTGCCGCTTACTGGAATATAAAATTGTATCGGGCGGGATGCGCAAAACGAAAAAAACCGCCACCGGTGAGCCAGG ACGAGTAACGGGAGCCGAGC
Downstream 100 bases:
>100_bases TACACTAACAGCCTCCTGAATTCTTCGTCCGCCGTTCGCCCTGAGCTTTTTGACAGGCTCGTTTAAGAGGGCCTGAGTCG ATCAGGGCAGGACAAGAATA
Product: disulfide bond formation protein DsbB
Products: NA
Alternate protein names: Disulfide oxidoreductase
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSNPMRPVRSILLAIFTGCAGLIGYALYLQLVENLLPCPLCVVQRMAYWLIGLTALAGFFHTPETTGRRIYAGLMAVFAF TGGLVALRQAWLVRYPEAFECGISPEEAFLNALPLARWWPVMFEANGDCADVTWKFASLTLPDWSAIFFMILAALSIYVL LVRENQRE
Sequences:
>Translated_168_residues MSNPMRPVRSILLAIFTGCAGLIGYALYLQLVENLLPCPLCVVQRMAYWLIGLTALAGFFHTPETTGRRIYAGLMAVFAF TGGLVALRQAWLVRYPEAFECGISPEEAFLNALPLARWWPVMFEANGDCADVTWKFASLTLPDWSAIFFMILAALSIYVL LVRENQRE >Mature_167_residues SNPMRPVRSILLAIFTGCAGLIGYALYLQLVENLLPCPLCVVQRMAYWLIGLTALAGFFHTPETTGRRIYAGLMAVFAFT GGLVALRQAWLVRYPEAFECGISPEEAFLNALPLARWWPVMFEANGDCADVTWKFASLTLPDWSAIFFMILAALSIYVLL VRENQRE
Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DsbB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DSBB_NITMU (Q2YA85)
Other databases:
- EMBL: CP000103 - RefSeq: YP_411728.1 - ProteinModelPortal: Q2YA85 - SMR: Q2YA85 - STRING: Q2YA85 - GeneID: 3785160 - GenomeReviews: CP000103_GR - KEGG: nmu:Nmul_A1033 - eggNOG: COG1495 - HOGENOM: HBG637909 - OMA: CILQRYA - ProtClustDB: CLSK585655 - BioCyc: NMUL323848:NMUL_A1033-MONOMER - GO: GO:0006810 - HAMAP: MF_00286 - InterPro: IPR003752 - InterPro: IPR022920
Pfam domain/function: PF02600 DsbB
EC number: NA
Molecular weight: Translated: 18814; Mature: 18683
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x12eeed50)-; HASH(0x12f5ded4)-; HASH(0x10c8cb14)-; HASH(0x12425344)-;
Cys/Met content:
3.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPMRPVRSILLAIFTGCAGLIGYALYLQLVENLLPCPLCVVQRMAYWLIGLTALAGFF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH HTPETTGRRIYAGLMAVFAFTGGLVALRQAWLVRYPEAFECGISPEEAFLNALPLARWWP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCHHHHHH VMFEANGDCADVTWKFASLTLPDWSAIFFMILAALSIYVLLVRENQRE HEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure SNPMRPVRSILLAIFTGCAGLIGYALYLQLVENLLPCPLCVVQRMAYWLIGLTALAGFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH HTPETTGRRIYAGLMAVFAFTGGLVALRQAWLVRYPEAFECGISPEEAFLNALPLARWWP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCHHHHHH VMFEANGDCADVTWKFASLTLPDWSAIFFMILAALSIYVLLVRENQRE HEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA