Click here to switch to the map view.

The map label for this gene is ycaR [C]

Identifier: 82702156

GI number: 82702156

Start: 1189655

End: 1189840

Strand: Reverse

Name: ycaR [C]

Synonym: Nmul_A1027

Alternate gene names: 82702156

Gene position: 1189840-1189655 (Counterclockwise)

Preceding gene: 82702157

Following gene: 82702155

Centisome position: 37.37

GC content: 53.76

Gene sequence:

>186_bases
ATGGATCCGAAATTGCTCGACATTCTGGTATGCCCCCTATGCAAATCACCGCTCCTGTACCGGAAGCCTGAAAACGAACT
CATCTGCAAGGCCGACAGGCTGGCATTCCCCATCCGGGATGGAATTCCCATCATGCTGGAAGATGAAGCCCGACGGTTGC
CGGTAGAAGAAGAGATCAGCCGATAG

Upstream 100 bases:

>100_bases
CCCGGAATCGGGAATAGCGCCGGGAGCCCGATGAAAAACAGAAAGCTCGGCTTATTGGAAGCAACCGATTGAGGTGAAAT
CTTAAAATTGAGGCTGAATT

Downstream 100 bases:

>100_bases
ATATCCGGCGATGTATCGGATTTCCGGTCTCAGGAGCCTGAAAGGGTATGAAGAATGAAGAGTCTGAACAGTGAGGCGAT
TCTTGGCGCTTTGGTAGCGG

Product: hypothetical protein

Products: ADP; 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-beta-; $D-glucosamine 1,4'-bisphosphate

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MDPKLLDILVCPLCKSPLLYRKPENELICKADRLAFPIRDGIPIMLEDEARRLPVEEEISR

Sequences:

>Translated_61_residues
MDPKLLDILVCPLCKSPLLYRKPENELICKADRLAFPIRDGIPIMLEDEARRLPVEEEISR
>Mature_61_residues
MDPKLLDILVCPLCKSPLLYRKPENELICKADRLAFPIRDGIPIMLEDEARRLPVEEEISR

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=60, Percent_Identity=55, Blast_Score=73, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1027_NITMU (Q2YA91)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_411722.1
- ProteinModelPortal:   Q2YA91
- SMR:   Q2YA91
- STRING:   Q2YA91
- GeneID:   3786552
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A1027
- eggNOG:   COG2835
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- PhylomeDB:   Q2YA91
- BioCyc:   NMUL323848:NMUL_A1027-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: 2.7.1.130

Molecular weight: Translated: 7077; Mature: 7077

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPKLLDILVCPLCKSPLLYRKPENELICKADRLAFPIRDGIPIMLEDEARRLPVEEEIS
CCCHHHHHEECCCCCCCCEEECCCCCEEEECCCEEECCCCCCCEEECCCCCCCCCHHHHC
R
C
>Mature Secondary Structure
MDPKLLDILVCPLCKSPLLYRKPENELICKADRLAFPIRDGIPIMLEDEARRLPVEEEIS
CCCHHHHHEECCCCCCCCEEECCCCCEEEECCCEEECCCCCCCEEECCCCCCCCCHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 2,3-Bis-(3-hydroxytetradecanoyl)-D-glucosaminyl-(beta-D-1,6)-2,3-; $bis(3-hydroxy-tetradecanoyl)-D-glucosaminyl beta-phosphate

Specific reaction: ATP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-(beta-D-1,6-)- $2,3-bis(3-hydroxy-tetradecanoyl)-D-glucosaminyl beta-phosphate = ADP + 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6- $beta-D-glucosa

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA