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The map label for this gene is 82702034

Identifier: 82702034

GI number: 82702034

Start: 1029891

End: 1030478

Strand: Direct

Name: 82702034

Synonym: Nmul_A0905

Alternate gene names: NA

Gene position: 1029891-1030478 (Clockwise)

Preceding gene: 82702033

Following gene: 82702035

Centisome position: 32.34

GC content: 53.4

Gene sequence:

>588_bases
ATGAAATTGCAACTTCAGATCACCACACGCGATATTCCCCATTCTGACGCACTGGAAAGCCATATTCGGCAAAAAGCGGA
AAAGCTCGAGACTTTTTATCCCCAGATCATGGGGTGCAGGATAGTCGTCGAGGTTCCTCACAAACACAAACACCAGGGCA
ACCTGTTCAATGTGCGGCTGGACATCACAGTGCCGGGAAAGGAGCTTGTGGTGACCCGTGAACCGAACGAGGATGTGTAC
GTTGCGCTGCGCGATGCATTCGACGCCGCAAAGCGTCAGCTCGAAGACTACGGACGGCGCCAGCGCGGTGAAGTCAAGGC
GCATGCTCCCGTCCTGCATGGAAAGGTGGTACGGCTGATGCCGGAGGAAGGCTATGGTTTCGTCGAAACTTCGAGTGGAC
AGGAGTTGTACTTTCATCGCGAAAATCTTGCCAACAATAACTTTGAGCAATTGGAAGAAGGAAGCGAGGTGCAGTTCCTC
GAAGATATCGGCAGTGAAGGTTTTCAGGCAAAGCGCGTCAGTACAGGCAAGCGTCAGGTAGAAGAACCCGAAGAAGCAGA
GCCGCGCTTGACAGGTTCGGCGGATTAG

Upstream 100 bases:

>100_bases
GCGCGCGACATAGTCCTGGCAGTTCTGGCGGAGGCTCCGGTCTTTCAGGCTTATCCTAAGCCTGGTGCAGTATGATTCTA
TCATCGAGAGGACATAAGTC

Downstream 100 bases:

>100_bases
ACTAAGTCCGGCGCACTCAACCGAAGAATGTAAAGTGCAGGGAGCAAAGCGGCAAAGGGGATAGGAGATTGCCATGAAAA
TGGACATAGGCACCGGTGAT

Product: putative sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: SSU Ribosomal Modulation Protein; Cold-Shock Protein; Cold-Shock Domain-Containing Protein; Sigma-54 Modulation Protein; Cold Shock Protein; Cold Shock Domain-Contain Protein

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKLQLQITTRDIPHSDALESHIRQKAEKLETFYPQIMGCRIVVEVPHKHKHQGNLFNVRLDITVPGKELVVTREPNEDVY
VALRDAFDAAKRQLEDYGRRQRGEVKAHAPVLHGKVVRLMPEEGYGFVETSSGQELYFHRENLANNNFEQLEEGSEVQFL
EDIGSEGFQAKRVSTGKRQVEEPEEAEPRLTGSAD

Sequences:

>Translated_195_residues
MKLQLQITTRDIPHSDALESHIRQKAEKLETFYPQIMGCRIVVEVPHKHKHQGNLFNVRLDITVPGKELVVTREPNEDVY
VALRDAFDAAKRQLEDYGRRQRGEVKAHAPVLHGKVVRLMPEEGYGFVETSSGQELYFHRENLANNNFEQLEEGSEVQFL
EDIGSEGFQAKRVSTGKRQVEEPEEAEPRLTGSAD
>Mature_195_residues
MKLQLQITTRDIPHSDALESHIRQKAEKLETFYPQIMGCRIVVEVPHKHKHQGNLFNVRLDITVPGKELVVTREPNEDVY
VALRDAFDAAKRQLEDYGRRQRGEVKAHAPVLHGKVVRLMPEEGYGFVETSSGQELYFHRENLANNNFEQLEEGSEVQFL
EDIGSEGFQAKRVSTGKRQVEEPEEAEPRLTGSAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22277; Mature: 22277

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQLQITTRDIPHSDALESHIRQKAEKLETFYPQIMGCRIVVEVPHKHKHQGNLFNVRL
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEE
DITVPGKELVVTREPNEDVYVALRDAFDAAKRQLEDYGRRQRGEVKAHAPVLHGKVVRLM
EEEECCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEE
PEEGYGFVETSSGQELYFHRENLANNNFEQLEEGSEVQFLEDIGSEGFQAKRVSTGKRQV
CCCCCCEEECCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHHCCCCCCEEHHHCCCHHHC
EEPEEAEPRLTGSAD
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLQLQITTRDIPHSDALESHIRQKAEKLETFYPQIMGCRIVVEVPHKHKHQGNLFNVRL
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEE
DITVPGKELVVTREPNEDVYVALRDAFDAAKRQLEDYGRRQRGEVKAHAPVLHGKVVRLM
EEEECCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEE
PEEGYGFVETSSGQELYFHRENLANNNFEQLEEGSEVQFLEDIGSEGFQAKRVSTGKRQV
CCCCCCEEECCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHHCCCCCCEEHHHCCCHHHC
EEPEEAEPRLTGSAD
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA