Click here to switch to the map view.

The map label for this gene is arnC [H]

Identifier: 82701858

GI number: 82701858

Start: 845087

End: 846061

Strand: Direct

Name: arnC [H]

Synonym: Nmul_A0725

Alternate gene names: 82701858

Gene position: 845087-846061 (Clockwise)

Preceding gene: 82701857

Following gene: 82701860

Centisome position: 26.54

GC content: 48.72

Gene sequence:

>975_bases
GTGAAACATTCTGAACCCCGTATATCTGTAGTCATTCCGGCCTTTCGCTCTGAAAGGACGCTGCCCGAATTGTGTATCCG
ATTAGGTAAGGTACTTCCATCGGTGTGTCCTGAGTATGAAATTATTATTGTTGAGGATGGGGGGGGAGGACAAACATGGG
AGATCATCCAGGCCTTGGCTGCGGCTGATGCACGGATCCGCGGAATGCTTCATAGCCGCAATTACGGCCAGCATAACGCC
ATCCTGAGCGGGATTAGGGCTGCTCGTTTTGAGATCATCATCACTATGGACGATGATCTTCAAAATCCGCCCGAAGAGAT
TCCCGCTCTATTAACCAAGCTTGCGGAAGGGTATGACGTAGTATACGGCACTCCCTGTCAGGAAAAACATGGGGTTCTTC
GAGATATTGCTTCGCTCATTACAAAGCGCATGCTTGAACATGCAATGGGTGGTGATGTGTCGCGACATATCAGTGCTTAT
CGCGTGTTTAAAACTCATCTTCGCGATGCCTTCAAGGATTATCGCAACCCGTTTGTCTCTATTGATGTTTTGCTGACTTG
GGCAACTACTCACTTTGCTGCAATCCCGGTTCGCCATGATTCCCGTACAGTAGGAGCCTCGGGCTATACATTAGCCCGAC
TGGTCAGGCATACATTAAATATGGTCACAGGATACAGTGTTTTCCCTCTTCAGCTAGCAAGCTGGACAGGCTTTTTGTTT
ACGTTGCTTGGCATGTGTTTGTTGATGTATGTTCTTGGACGCTATCTCCTCTATGGGAGCGGAATGGCAGGATTTCCATT
TCTCGCATCGATAATTGCAATTTTCGCCGGAGCCCAGATGTTTGCGCTCGGAATCATTGGGGAATACCTGTCTCGTATGC
ACGTCAACAGCATGGGTCGGCCGTTAGCGGTGATAAAGGAGGCAACATTCCCGGTGAATAGCACAAGTAATAAAGAAGGT
TCCAGGTCGGGTTGA

Upstream 100 bases:

>100_bases
TTTTTTGTAAGGCATCCCATGTTTTCTCAATATATCATCGGCCTGAAAACCCTGTACAGAAGATAGAGATCATTGTTCCT
CGATTTCCCCGTATAGCCCT

Downstream 100 bases:

>100_bases
AGTAGATTAGCCAAAGCAGGTGGGTGAAACGTCACAGTTTATGCTGGGGTTACCCGAAATGAAGTTTGTTTGCGATCGGA
ACGGGCTTGATATTCGCCTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKHSEPRISVVIPAFRSERTLPELCIRLGKVLPSVCPEYEIIIVEDGGGGQTWEIIQALAAADARIRGMLHSRNYGQHNA
ILSGIRAARFEIIITMDDDLQNPPEEIPALLTKLAEGYDVVYGTPCQEKHGVLRDIASLITKRMLEHAMGGDVSRHISAY
RVFKTHLRDAFKDYRNPFVSIDVLLTWATTHFAAIPVRHDSRTVGASGYTLARLVRHTLNMVTGYSVFPLQLASWTGFLF
TLLGMCLLMYVLGRYLLYGSGMAGFPFLASIIAIFAGAQMFALGIIGEYLSRMHVNSMGRPLAVIKEATFPVNSTSNKEG
SRSG

Sequences:

>Translated_324_residues
MKHSEPRISVVIPAFRSERTLPELCIRLGKVLPSVCPEYEIIIVEDGGGGQTWEIIQALAAADARIRGMLHSRNYGQHNA
ILSGIRAARFEIIITMDDDLQNPPEEIPALLTKLAEGYDVVYGTPCQEKHGVLRDIASLITKRMLEHAMGGDVSRHISAY
RVFKTHLRDAFKDYRNPFVSIDVLLTWATTHFAAIPVRHDSRTVGASGYTLARLVRHTLNMVTGYSVFPLQLASWTGFLF
TLLGMCLLMYVLGRYLLYGSGMAGFPFLASIIAIFAGAQMFALGIIGEYLSRMHVNSMGRPLAVIKEATFPVNSTSNKEG
SRSG
>Mature_324_residues
MKHSEPRISVVIPAFRSERTLPELCIRLGKVLPSVCPEYEIIIVEDGGGGQTWEIIQALAAADARIRGMLHSRNYGQHNA
ILSGIRAARFEIIITMDDDLQNPPEEIPALLTKLAEGYDVVYGTPCQEKHGVLRDIASLITKRMLEHAMGGDVSRHISAY
RVFKTHLRDAFKDYRNPFVSIDVLLTWATTHFAAIPVRHDSRTVGASGYTLARLVRHTLNMVTGYSVFPLQLASWTGFLF
TLLGMCLLMYVLGRYLLYGSGMAGFPFLASIIAIFAGAQMFALGIIGEYLSRMHVNSMGRPLAVIKEATFPVNSTSNKEG
SRSG

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=322, Percent_Identity=31.3664596273292, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1788692, Length=303, Percent_Identity=25.0825082508251, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 35816; Mature: 35816

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSEPRISVVIPAFRSERTLPELCIRLGKVLPSVCPEYEIIIVEDGGGGQTWEIIQALA
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
AADARIRGMLHSRNYGQHNAILSGIRAARFEIIITMDDDLQNPPEEIPALLTKLAEGYDV
HHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCE
VYGTPCQEKHGVLRDIASLITKRMLEHAMGGDVSRHISAYRVFKTHLRDAFKDYRNPFVS
EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IDVLLTWATTHFAAIPVRHDSRTVGASGYTLARLVRHTLNMVTGYSVFPLQLASWTGFLF
EHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TLLGMCLLMYVLGRYLLYGSGMAGFPFLASIIAIFAGAQMFALGIIGEYLSRMHVNSMGR
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLAVIKEATFPVNSTSNKEGSRSG
CHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKHSEPRISVVIPAFRSERTLPELCIRLGKVLPSVCPEYEIIIVEDGGGGQTWEIIQALA
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
AADARIRGMLHSRNYGQHNAILSGIRAARFEIIITMDDDLQNPPEEIPALLTKLAEGYDV
HHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCE
VYGTPCQEKHGVLRDIASLITKRMLEHAMGGDVSRHISAYRVFKTHLRDAFKDYRNPFVS
EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IDVLLTWATTHFAAIPVRHDSRTVGASGYTLARLVRHTLNMVTGYSVFPLQLASWTGFLF
EHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TLLGMCLLMYVLGRYLLYGSGMAGFPFLASIIAIFAGAQMFALGIIGEYLSRMHVNSMGR
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLAVIKEATFPVNSTSNKEGSRSG
CHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA