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The map label for this gene is insF1 [H]

Identifier: 82701679

GI number: 82701679

Start: 630830

End: 631699

Strand: Reverse

Name: insF1 [H]

Synonym: Nmul_A0545

Alternate gene names: 82701679

Gene position: 631699-630830 (Counterclockwise)

Preceding gene: 82701680

Following gene: 82701678

Centisome position: 19.84

GC content: 55.86

Gene sequence:

>870_bases
ATGAGATATCGCATGATCGAACGCTGCCGCGATGCCTTCCCCATTCGCCTGATGTGTCGTTGTCTGCATGTATCAACCAG
CGGCTACTATGATTGGCGAGATCGCCCCTTGAGTCAGAGAGCGCATGATGACCGGCGTTTGCTGGAGCGCATCAGGAAGA
TTCATGATGGCAGCGATGGGGTGATGGGCAGTCCTCGAGTCTGGAAGGAGTTGCGTTATGAAGGCGAGGCGTGTGGGTTG
AACCGCATAGCACGGCTGATGCGCCAGCAGAGGTTGTATGGCATCCCGCAGCGTAAACGCTGGCACAAGAAGGTCTGTGG
CCTTCGACCGGAGAATGTGCACAATCACTTGCAGCGGGACTTTACAGCAAGTGAGCCCAACAGCCGGTGGGTGACGGACA
TAACCTATGTGCGCACTCAGGAAAGCTGGCTTTATCTGTGCGTGGTCGTGGACCTGTACTCGGGCATCGTGGTCGGCTGG
TCAATGAGCCACTGCCAGGATCCGCAACTGGTGCTGCAGGCCGTACTCATGGCGCTTTGGCAGCGTGAGGCAAAAACTCC
CGTCATCCTGCACTCAGATCGCGGCTGTCAGTTTACCAGTGACGAGTATCAACGCTTCCTGCAAGGACACAATCTGATTT
GCAGCATGAGCGCTGTCGGTAGTTGTGCCGACAACGCGCCAGCAGAGAGCTTCTTTGGCTTGCTCAAGCGGGAGCGAGTA
TATCGTCGCCAGTATCGAACCCGGGCTGAGGCGCGCACAGATATCTTCGACTATATCGAGCGATTCCATAATCCGCGAAA
ACGGCGACAGCTGGAAATGCGTCAGAAGCAGGATTTAGGCTTAACCAAACCGTCCGGAGAAATGGGGTAA

Upstream 100 bases:

>100_bases
GTGATGAGGAGATGGCTGCGCTCAAACGTGAGCTGATCCAAGTTAGGAAGGAGCGTGATTTTTTAAAAGAAGCGGCGGCG
TTATTCGCGAAAGCGTCGAA

Downstream 100 bases:

>100_bases
AACCCCATGGAGGTGTCTCTGCATTAGATATTTTCTCGATAAGCTGGTTAAAGGTTTACACGTCTGAGGCTTCTTGAATG
CCTTCTAAAGTATCCTAATG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRYRMIERCRDAFPIRLMCRCLHVSTSGYYDWRDRPLSQRAHDDRRLLERIRKIHDGSDGVMGSPRVWKELRYEGEACGL
NRIARLMRQQRLYGIPQRKRWHKKVCGLRPENVHNHLQRDFTASEPNSRWVTDITYVRTQESWLYLCVVVDLYSGIVVGW
SMSHCQDPQLVLQAVLMALWQREAKTPVILHSDRGCQFTSDEYQRFLQGHNLICSMSAVGSCADNAPAESFFGLLKRERV
YRRQYRTRAEARTDIFDYIERFHNPRKRRQLEMRQKQDLGLTKPSGEMG

Sequences:

>Translated_289_residues
MRYRMIERCRDAFPIRLMCRCLHVSTSGYYDWRDRPLSQRAHDDRRLLERIRKIHDGSDGVMGSPRVWKELRYEGEACGL
NRIARLMRQQRLYGIPQRKRWHKKVCGLRPENVHNHLQRDFTASEPNSRWVTDITYVRTQESWLYLCVVVDLYSGIVVGW
SMSHCQDPQLVLQAVLMALWQREAKTPVILHSDRGCQFTSDEYQRFLQGHNLICSMSAVGSCADNAPAESFFGLLKRERV
YRRQYRTRAEARTDIFDYIERFHNPRKRRQLEMRQKQDLGLTKPSGEMG
>Mature_289_residues
MRYRMIERCRDAFPIRLMCRCLHVSTSGYYDWRDRPLSQRAHDDRRLLERIRKIHDGSDGVMGSPRVWKELRYEGEACGL
NRIARLMRQQRLYGIPQRKRWHKKVCGLRPENVHNHLQRDFTASEPNSRWVTDITYVRTQESWLYLCVVVDLYSGIVVGW
SMSHCQDPQLVLQAVLMALWQREAKTPVILHSDRGCQFTSDEYQRFLQGHNLICSMSAVGSCADNAPAESFFGLLKRERV
YRRQYRTRAEARTDIFDYIERFHNPRKRRQLEMRQKQDLGLTKPSGEMG

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=243, Percent_Identity=33.7448559670782, Blast_Score=133, Evalue=2e-31,
Organism=Escherichia coli, GI1788405, Length=270, Percent_Identity=40.3703703703704, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI1787263, Length=270, Percent_Identity=40.3703703703704, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI1786753, Length=270, Percent_Identity=40.3703703703704, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI1786570, Length=270, Percent_Identity=40.3703703703704, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI1786490, Length=270, Percent_Identity=40.3703703703704, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI1789981, Length=266, Percent_Identity=30.8270676691729, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34298; Mature: 34298

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRMIERCRDAFPIRLMCRCLHVSTSGYYDWRDRPLSQRAHDDRRLLERIRKIHDGSDG
CCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCC
VMGSPRVWKELRYEGEACGLNRIARLMRQQRLYGIPQRKRWHKKVCGLRPENVHNHLQRD
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHC
FTASEPNSRWVTDITYVRTQESWLYLCVVVDLYSGIVVGWSMSHCQDPQLVLQAVLMALW
CCCCCCCCCEEEHHEEEEECCCHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHH
QREAKTPVILHSDRGCQFTSDEYQRFLQGHNLICSMSAVGSCADNAPAESFFGLLKRERV
HHHCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHH
YRRQYRTRAEARTDIFDYIERFHNPRKRRQLEMRQKQDLGLTKPSGEMG
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRYRMIERCRDAFPIRLMCRCLHVSTSGYYDWRDRPLSQRAHDDRRLLERIRKIHDGSDG
CCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCC
VMGSPRVWKELRYEGEACGLNRIARLMRQQRLYGIPQRKRWHKKVCGLRPENVHNHLQRD
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHC
FTASEPNSRWVTDITYVRTQESWLYLCVVVDLYSGIVVGWSMSHCQDPQLVLQAVLMALW
CCCCCCCCCEEEHHEEEEECCCHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHH
QREAKTPVILHSDRGCQFTSDEYQRFLQGHNLICSMSAVGSCADNAPAESFFGLLKRERV
HHHCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHH
YRRQYRTRAEARTDIFDYIERFHNPRKRRQLEMRQKQDLGLTKPSGEMG
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]