| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is 82701671
Identifier: 82701671
GI number: 82701671
Start: 619465
End: 620466
Strand: Direct
Name: 82701671
Synonym: Nmul_A0537
Alternate gene names: NA
Gene position: 619465-620466 (Clockwise)
Preceding gene: 82701670
Following gene: 82701672
Centisome position: 19.45
GC content: 58.18
Gene sequence:
>1002_bases TTGAGCGCCAGTCCGACAATAACGACCCTGAACACAACCTTACGCGAGTTTAAGCCGGACGCGAGCTACAGCTCGCCGCT GAATAGAGTATCGCGCCTGAAAACTGCGATACTGGTCTCGGTTATTCTCCATGTCGTGGTTTTGTCCGGCGTCACTTTCA AGTTCCCTCTTCCGCAAATCCGTGCAGTGAGCGCGCCGCTGGAGGTGATGCTGGTGAATAGGGAGCCCGCTCTCCCTCCG GCCGCGGAGGACAGGAAAGAAGCGTTGCCGCGCGTGGCGCGCGCGAGTCCTGCTGTAAAAGGCAACGCCAGCCGGCATCC AGCCCAACCCAGTCTTCCCCTGCCGAAACAGGAAGATACAGCAAATATTCCCGGGGAGACGATCGCCGATTCCGCTGCCG CTGTCCAGGAAGCAGGACCGCGCGAACTTCGGACACCGCCATTGATGGCAGCCCCCGAGAATGACAGCCATCAAAGTGCT GATGAGCCTGATCCCCTGCTCGCTCCGGCTCAGCCTCAGATTAAAACCGGGCAGGACCAGAACGCTATCTTTGATACTGC GGACCTGGTTCAGCGCGGATTGGCAATCGCACGCGTGGCGGCCCGCGGGGACGCGAGTCTTGAAACCTATCAAAAACCGC TGAAACGAAAGTTTATCGGCAGCCGCACCCGGGACTATCGTTTTGCCCGCTACGCCGAAGACTGGCGCCTCAAGGTGGAG CGGATCGGGAACCTGAATTATCCCGAAGCGGCAAAACGTGAACAGCTGTATGGCAGCTTACAGCTTACCGTTGGCATCCG CTCCGATGGCAGCCTGGAATCGGTTGAAATAAACCGCTCTTCCGGAAAGAAAATTCTGGATCAGGCAGCCGTCCGTATCG TGAAGCTGGCGGGGCAGAACGGCTTCGCCCCTTTTCCTCCCGAGCTCAGCCGGGATACCGATATTCTGCATATTACCCGC TCCTGGGTATTCACCAGCGCCAATGAGCTGACAAGTGAGTAA
Upstream 100 bases:
>100_bases GTATAAAATTCCTGAGAAAACTGCAAGCTTGAGATTTATCCTGTAACATAGCAGGCCGTTATGGTTTACGGCTTTTCAGT CTCATTATTCTTCGGCAGAT
Downstream 100 bases:
>100_bases CCATGCGGGCGTACCGGTTTGCGCGCAGGTATTGCTCGCAACGGCATGTCTCCCCGTTTCTTCCTCCCGGTCGCTCCAAT CGGAGTCTGATTCCGTGATT
Product: TonB-like protein
Products: NA
Alternate protein names: NB Protein; NB Family C-Terminal Domain Protein; NB-Like Protein; NB Domain-Containing Protein; NB-Like; NB C-Terminal; Periplasmic Protein nB Links Inner And Outer Membranes; GETHR Pentapeptide; Nb Family Protein; NB Domain Protein; NB-Like Domain-Containing Protein; NB-Dependent Receptor; NB Family C-Terminal Domain-Containing; Nb Protein
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSASPTITTLNTTLREFKPDASYSSPLNRVSRLKTAILVSVILHVVVLSGVTFKFPLPQIRAVSAPLEVMLVNREPALPP AAEDRKEALPRVARASPAVKGNASRHPAQPSLPLPKQEDTANIPGETIADSAAAVQEAGPRELRTPPLMAAPENDSHQSA DEPDPLLAPAQPQIKTGQDQNAIFDTADLVQRGLAIARVAARGDASLETYQKPLKRKFIGSRTRDYRFARYAEDWRLKVE RIGNLNYPEAAKREQLYGSLQLTVGIRSDGSLESVEINRSSGKKILDQAAVRIVKLAGQNGFAPFPPELSRDTDILHITR SWVFTSANELTSE
Sequences:
>Translated_333_residues MSASPTITTLNTTLREFKPDASYSSPLNRVSRLKTAILVSVILHVVVLSGVTFKFPLPQIRAVSAPLEVMLVNREPALPP AAEDRKEALPRVARASPAVKGNASRHPAQPSLPLPKQEDTANIPGETIADSAAAVQEAGPRELRTPPLMAAPENDSHQSA DEPDPLLAPAQPQIKTGQDQNAIFDTADLVQRGLAIARVAARGDASLETYQKPLKRKFIGSRTRDYRFARYAEDWRLKVE RIGNLNYPEAAKREQLYGSLQLTVGIRSDGSLESVEINRSSGKKILDQAAVRIVKLAGQNGFAPFPPELSRDTDILHITR SWVFTSANELTSE >Mature_332_residues SASPTITTLNTTLREFKPDASYSSPLNRVSRLKTAILVSVILHVVVLSGVTFKFPLPQIRAVSAPLEVMLVNREPALPPA AEDRKEALPRVARASPAVKGNASRHPAQPSLPLPKQEDTANIPGETIADSAAAVQEAGPRELRTPPLMAAPENDSHQSAD EPDPLLAPAQPQIKTGQDQNAIFDTADLVQRGLAIARVAARGDASLETYQKPLKRKFIGSRTRDYRFARYAEDWRLKVER IGNLNYPEAAKREQLYGSLQLTVGIRSDGSLESVEINRSSGKKILDQAAVRIVKLAGQNGFAPFPPELSRDTDILHITRS WVFTSANELTSE
Specific function: Unknown
COG id: COG0810
COG function: function code M; Periplasmic protein TonB, links inner and outer membranes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36334; Mature: 36202
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPTITTLNTTLREFKPDASYSSPLNRVSRLKTAILVSVILHVVVLSGVTFKFPLPQI CCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHH RAVSAPLEVMLVNREPALPPAAEDRKEALPRVARASPAVKGNASRHPAQPSLPLPKQEDT HHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC ANIPGETIADSAAAVQEAGPRELRTPPLMAAPENDSHQSADEPDPLLAPAQPQIKTGQDQ CCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NAIFDTADLVQRGLAIARVAARGDASLETYQKPLKRKFIGSRTRDYRFARYAEDWRLKVE CHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RIGNLNYPEAAKREQLYGSLQLTVGIRSDGSLESVEINRSSGKKILDQAAVRIVKLAGQN HHCCCCCCCHHHHHHHHCEEEEEEEECCCCCEEEEEECHHCCHHHHHHHHHHHHHHHCCC GFAPFPPELSRDTDILHITRSWVFTSANELTSE CCCCCCCCCCCCCCEEEEEHHHHHHCHHHHCCC >Mature Secondary Structure SASPTITTLNTTLREFKPDASYSSPLNRVSRLKTAILVSVILHVVVLSGVTFKFPLPQI CCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHH RAVSAPLEVMLVNREPALPPAAEDRKEALPRVARASPAVKGNASRHPAQPSLPLPKQEDT HHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC ANIPGETIADSAAAVQEAGPRELRTPPLMAAPENDSHQSADEPDPLLAPAQPQIKTGQDQ CCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NAIFDTADLVQRGLAIARVAARGDASLETYQKPLKRKFIGSRTRDYRFARYAEDWRLKVE CHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RIGNLNYPEAAKREQLYGSLQLTVGIRSDGSLESVEINRSSGKKILDQAAVRIVKLAGQN HHCCCCCCCHHHHHHHHCEEEEEEEECCCCCEEEEEECHHCCHHHHHHHHHHHHHHHCCC GFAPFPPELSRDTDILHITRSWVFTSANELTSE CCCCCCCCCCCCCCEEEEEHHHHHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA