Click here to switch to the map view.

The map label for this gene is smf [H]

Identifier: 82701529

GI number: 82701529

Start: 436563

End: 437681

Strand: Direct

Name: smf [H]

Synonym: Nmul_A0395

Alternate gene names: 82701529

Gene position: 436563-437681 (Clockwise)

Preceding gene: 82701517

Following gene: 82701530

Centisome position: 13.71

GC content: 57.73

Gene sequence:

>1119_bases
ATGTCATCAATACCTGTCCAGGTAATTTCGCAGCGGAATATCGAACCCGATATCGCATCCTGGCTCGCCCTGGACTTGAT
CGATGGCCTGGGTGACGAGTCGATGAGGTGTTTGCTTGCGACTTTTGGCAGCCCCGCTGCAATTCTTTCGGCCAGCATGA
CTTCATTGGAGCGCGTGGTTAAAAGGAAGGTGGCGGACAACATTATCGGGGGAGCTGACCCGCAAAAGCTGAATGCTTCG
CTCAAATGGCTGGAAGACCCGCAGAATTCCGTCATCACCCTGGCAGATCCGGATTATCCCGCACTGTTACTCCATATCCC
CGATCCCCCGCCGCTTCTCTATGTCAAAGGAAAGCGCGCTCTGCTGAACGCGCCAATGCTTGCCATTGTCGGCAGCCGGA
ATGCTACGCCCCAAGGTCTTTCCAATGCAGAAGCCTTTGCCGAGGCGGCGAGCAATGCAGGATTTTCCATCGCCAGCGGC
ATGGCTCTTGGCATTGACGCCGCAGCGCATCGTGGAGGACTGCGAGGAAGGGCCAGCAGTATTGCCGTGGTGGGTACCGG
ACTGGATCTCGTTTATCCCGCAAGCCATCGCAAGCTGGCGCATGAGTTGGCGGAAAGGGGCGCGCTTGTCTCCGAGTTTC
CGTTGGGCACGCCTCCCATCGGCAGCAACTTTCCGCGTCGCAATCGCATCATCAGTGGCCTGAGCAGGGGATGCCTTGTG
GTCGAGGCCGCATTGCAGAGCGGTTCTCTTATCACGGCGCGGCAGGCGTTGGAGCAGGGACGGGAAGTATTCGCCATTCC
GGGCTCCATCCACTCGCCCTTGTCCAGGGGATGCCATGCACTCATCAAGCAGGGTGCCAAGCTGGTGGAAAGCGCAGGAG
ATATTCTGGAGGAATTCGGTTGCCCATCTGGCATCCCCATCCTCGTTCCGGAAGGGGGTGAGGCTGCAAGAGAAGAATTT
TTGCTGTTGAAACACCTCAGCCATGACATCATCGATGTCGATACCCTCTGCCTGCGTAGTGGCTTGACGGTAGAAACGGT
ATCGGCCATGCTGTTGACGCTTGAACTGGATGGCATAATCGCCAGTCTTCCCGGCGGGCGTTACCAGCGGCTCCGATAG

Upstream 100 bases:

>100_bases
ATGACGGTAACCGGGGATTTGGGCTCCAGGTTTATCACCGTGAGTTCCGCAACGGTGAAGGGATGAAGTCCGCCGGATGC
GGTTACGGGATGAAAAGACC

Downstream 100 bases:

>100_bases
GTGGCGGTGTCCGAGGTATGTACGGCTTTCGTATGATCACCCCATCCGGAGGGGGTAAGAGGGGATAACGTGGGACCGGA
AGAGATTGCAGGAGTTGCAG

Product: DNA processing protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MSSIPVQVISQRNIEPDIASWLALDLIDGLGDESMRCLLATFGSPAAILSASMTSLERVVKRKVADNIIGGADPQKLNAS
LKWLEDPQNSVITLADPDYPALLLHIPDPPPLLYVKGKRALLNAPMLAIVGSRNATPQGLSNAEAFAEAASNAGFSIASG
MALGIDAAAHRGGLRGRASSIAVVGTGLDLVYPASHRKLAHELAERGALVSEFPLGTPPIGSNFPRRNRIISGLSRGCLV
VEAALQSGSLITARQALEQGREVFAIPGSIHSPLSRGCHALIKQGAKLVESAGDILEEFGCPSGIPILVPEGGEAAREEF
LLLKHLSHDIIDVDTLCLRSGLTVETVSAMLLTLELDGIIASLPGGRYQRLR

Sequences:

>Translated_372_residues
MSSIPVQVISQRNIEPDIASWLALDLIDGLGDESMRCLLATFGSPAAILSASMTSLERVVKRKVADNIIGGADPQKLNAS
LKWLEDPQNSVITLADPDYPALLLHIPDPPPLLYVKGKRALLNAPMLAIVGSRNATPQGLSNAEAFAEAASNAGFSIASG
MALGIDAAAHRGGLRGRASSIAVVGTGLDLVYPASHRKLAHELAERGALVSEFPLGTPPIGSNFPRRNRIISGLSRGCLV
VEAALQSGSLITARQALEQGREVFAIPGSIHSPLSRGCHALIKQGAKLVESAGDILEEFGCPSGIPILVPEGGEAAREEF
LLLKHLSHDIIDVDTLCLRSGLTVETVSAMLLTLELDGIIASLPGGRYQRLR
>Mature_371_residues
SSIPVQVISQRNIEPDIASWLALDLIDGLGDESMRCLLATFGSPAAILSASMTSLERVVKRKVADNIIGGADPQKLNASL
KWLEDPQNSVITLADPDYPALLLHIPDPPPLLYVKGKRALLNAPMLAIVGSRNATPQGLSNAEAFAEAASNAGFSIASGM
ALGIDAAAHRGGLRGRASSIAVVGTGLDLVYPASHRKLAHELAERGALVSEFPLGTPPIGSNFPRRNRIISGLSRGCLVV
EAALQSGSLITARQALEQGREVFAIPGSIHSPLSRGCHALIKQGAKLVESAGDILEEFGCPSGIPILVPEGGEAAREEFL
LLKHLSHDIIDVDTLCLRSGLTVETVSAMLLTLELDGIIASLPGGRYQRLR

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=367, Percent_Identity=43.3242506811989, Blast_Score=233, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39149; Mature: 39017

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIPVQVISQRNIEPDIASWLALDLIDGLGDESMRCLLATFGSPAAILSASMTSLERVV
CCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KRKVADNIIGGADPQKLNASLKWLEDPQNSVITLADPDYPALLLHIPDPPPLLYVKGKRA
HHHHHHHHCCCCCHHHHCCHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEECCCHH
LLNAPMLAIVGSRNATPQGLSNAEAFAEAASNAGFSIASGMALGIDAAAHRGGLRGRASS
HHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCHHHHHCCCCCCCCCE
IAVVGTGLDLVYPASHRKLAHELAERGALVSEFPLGTPPIGSNFPRRNRIISGLSRGCLV
EEEEECCCEEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHE
VEAALQSGSLITARQALEQGREVFAIPGSIHSPLSRGCHALIKQGAKLVESAGDILEEFG
EHHHHCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
CPSGIPILVPEGGEAAREEFLLLKHLSHDIIDVDTLCLRSGLTVETVSAMLLTLELDGII
CCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHEEECCCEE
ASLPGGRYQRLR
EECCCCCCCCCC
>Mature Secondary Structure 
SSIPVQVISQRNIEPDIASWLALDLIDGLGDESMRCLLATFGSPAAILSASMTSLERVV
CCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KRKVADNIIGGADPQKLNASLKWLEDPQNSVITLADPDYPALLLHIPDPPPLLYVKGKRA
HHHHHHHHCCCCCHHHHCCHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEECCCHH
LLNAPMLAIVGSRNATPQGLSNAEAFAEAASNAGFSIASGMALGIDAAAHRGGLRGRASS
HHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCHHHHHCCCCCCCCCE
IAVVGTGLDLVYPASHRKLAHELAERGALVSEFPLGTPPIGSNFPRRNRIISGLSRGCLV
EEEEECCCEEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHE
VEAALQSGSLITARQALEQGREVFAIPGSIHSPLSRGCHALIKQGAKLVESAGDILEEFG
EHHHHCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
CPSGIPILVPEGGEAAREEFLLLKHLSHDIIDVDTLCLRSGLTVETVSAMLLTLELDGII
CCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHEEECCCEE
ASLPGGRYQRLR
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8432722; 8112305; 9278503 [H]