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The map label for this gene is yibD [C]

Identifier: 82701431

GI number: 82701431

Start: 320636

End: 321577

Strand: Direct

Name: yibD [C]

Synonym: Nmul_A0297

Alternate gene names: 82701431

Gene position: 320636-321577 (Clockwise)

Preceding gene: 82701426

Following gene: 82701433

Centisome position: 10.07

GC content: 52.34

Gene sequence:

>942_bases
ATGGCAGCCTCCAAGCCAACTGTTTCCATCATTATTCCGACCTATAATTGCGAAGCTTATATCGCGGAAACCCTTGACAG
CGTTCTCAGCCAGACATTCACGGATCTGGAATTAATTGTGGTTGACGATGGTTCCACTGATCGTACACGGGAAATCGTCA
CTTCATATGGGACTCCTGTCCGGCTCCTATCGCAGTCCAATTCCGGAGTATGCGCAGCTCGCAACTACGGAATCCGGGAG
GCGGCGGGAAGCTATGTCTGCCTCATGGATCATGATGACTACTGGTTTCCCGAGAAGCTGGCGTTACAGCTGGAGCAGAT
GTTTTCGCATCCGGAGGTAGGTCTCGTCTACAGTACGTTTGTCTGGTGGCATCCCGATGGAGAGGGTGTGTTTCCCAAGC
CGGAGAGCTTCAATATAGAAAAAATGCCGGGGGGGATAGACGAGGAATTTTCGGGATGGATATATCATCTGCTTCTGCTC
GATTGCTGGATTTTGACCAGCGCTGCATTGATACGCGCGGAGGTATTCGATAAATGCGGCGCTTACGATGAGTCTCTTCC
CTATAGCGAAGACTGGGACCTCTGGCTGCGCATTTCCCGGGAATATCCGGTTATCAAGCTGAATAAAGGCCTTACACTAT
ATCGCCAGCATCCTAAGCAAGGAAATCGCCTCACCAGAGAGATCGACTATCGGACCGTGCTGCTGCGAGATGCCGCTGAG
AAATGGGGGTTATGCAGCCGCGATGGTCGATGCATTTCTAGACAGCAGTTCATGCAAAACATCGCCCGCTACCAGATGGA
ATTTGGACTGAAACATCTTGCATCCAACAACTTGAAGCCCGCCATGCACGCCTTATGGAAGGCTTGGCTGAGCCATCCCG
CCAATCTCAAAACCCTTGCCTATGTCCCTGCCGGCCTCCTCGGATGGCGGCCGAAGTGGTGA

Upstream 100 bases:

>100_bases
GATTATTGCGTCTGAGTTGACTGCCAAGATCCGATTTTAGCGTTTAAAGAGCGGTATCGAGGTTAAATCTCCCGGATATA
CTATTTTTAAAATCTTCCCC

Downstream 100 bases:

>100_bases
GGGTCAGTACTTGCGTAATATTTTTTCGATCAACCAGAAAGGTCTGGCCAGCAACCAGCTCAATGATCGGTAAATCCGGA
AAAATTTGATCCGATAGTCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MAASKPTVSIIIPTYNCEAYIAETLDSVLSQTFTDLELIVVDDGSTDRTREIVTSYGTPVRLLSQSNSGVCAARNYGIRE
AAGSYVCLMDHDDYWFPEKLALQLEQMFSHPEVGLVYSTFVWWHPDGEGVFPKPESFNIEKMPGGIDEEFSGWIYHLLLL
DCWILTSAALIRAEVFDKCGAYDESLPYSEDWDLWLRISREYPVIKLNKGLTLYRQHPKQGNRLTREIDYRTVLLRDAAE
KWGLCSRDGRCISRQQFMQNIARYQMEFGLKHLASNNLKPAMHALWKAWLSHPANLKTLAYVPAGLLGWRPKW

Sequences:

>Translated_313_residues
MAASKPTVSIIIPTYNCEAYIAETLDSVLSQTFTDLELIVVDDGSTDRTREIVTSYGTPVRLLSQSNSGVCAARNYGIRE
AAGSYVCLMDHDDYWFPEKLALQLEQMFSHPEVGLVYSTFVWWHPDGEGVFPKPESFNIEKMPGGIDEEFSGWIYHLLLL
DCWILTSAALIRAEVFDKCGAYDESLPYSEDWDLWLRISREYPVIKLNKGLTLYRQHPKQGNRLTREIDYRTVLLRDAAE
KWGLCSRDGRCISRQQFMQNIARYQMEFGLKHLASNNLKPAMHALWKAWLSHPANLKTLAYVPAGLLGWRPKW
>Mature_312_residues
AASKPTVSIIIPTYNCEAYIAETLDSVLSQTFTDLELIVVDDGSTDRTREIVTSYGTPVRLLSQSNSGVCAARNYGIREA
AGSYVCLMDHDDYWFPEKLALQLEQMFSHPEVGLVYSTFVWWHPDGEGVFPKPESFNIEKMPGGIDEEFSGWIYHLLLLD
CWILTSAALIRAEVFDKCGAYDESLPYSEDWDLWLRISREYPVIKLNKGLTLYRQHPKQGNRLTREIDYRTVLLRDAAEK
WGLCSRDGRCISRQQFMQNIARYQMEFGLKHLASNNLKPAMHALWKAWLSHPANLKTLAYVPAGLLGWRPKW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=262, Percent_Identity=25.1908396946565, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1790044, Length=100, Percent_Identity=43, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788372, Length=210, Percent_Identity=28.0952380952381, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787259, Length=116, Percent_Identity=33.6206896551724, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35880; Mature: 35749

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASKPTVSIIIPTYNCEAYIAETLDSVLSQTFTDLELIVVDDGSTDRTREIVTSYGTPV
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCE
RLLSQSNSGVCAARNYGIREAAGSYVCLMDHDDYWFPEKLALQLEQMFSHPEVGLVYSTF
EEEECCCCCEEEECCCCCHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
VWWHPDGEGVFPKPESFNIEKMPGGIDEEFSGWIYHLLLLDCWILTSAALIRAEVFDKCG
EEECCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AYDESLPYSEDWDLWLRISREYPVIKLNKGLTLYRQHPKQGNRLTREIDYRTVLLRDAAE
CCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
KWGLCSRDGRCISRQQFMQNIARYQMEFGLKHLASNNLKPAMHALWKAWLSHPANLKTLA
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEE
YVPAGLLGWRPKW
ECCHHHCCCCCCC
>Mature Secondary Structure 
AASKPTVSIIIPTYNCEAYIAETLDSVLSQTFTDLELIVVDDGSTDRTREIVTSYGTPV
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCE
RLLSQSNSGVCAARNYGIREAAGSYVCLMDHDDYWFPEKLALQLEQMFSHPEVGLVYSTF
EEEECCCCCEEEECCCCCHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
VWWHPDGEGVFPKPESFNIEKMPGGIDEEFSGWIYHLLLLDCWILTSAALIRAEVFDKCG
EEECCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AYDESLPYSEDWDLWLRISREYPVIKLNKGLTLYRQHPKQGNRLTREIDYRTVLLRDAAE
CCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
KWGLCSRDGRCISRQQFMQNIARYQMEFGLKHLASNNLKPAMHALWKAWLSHPANLKTLA
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEE
YVPAGLLGWRPKW
ECCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA