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The map label for this gene is ahyR [H]

Identifier: 82701372

GI number: 82701372

Start: 254443

End: 255246

Strand: Direct

Name: ahyR [H]

Synonym: Nmul_A0238

Alternate gene names: 82701372

Gene position: 254443-255246 (Clockwise)

Preceding gene: 82701371

Following gene: 82701373

Centisome position: 7.99

GC content: 53.86

Gene sequence:

>804_bases
ATGGGTTTCTTCCCTCCGTTCACTGATGATCATCTTCAGCGTTACTTTCGCATCCTTCAGGAAGGGACAGCAGTTCGCCG
CCATTTTGACCTATTGAAGTGGCTGCAAGGGGAAGTGCAGCATTATTTGCCCCACGAGATCCTGCTTGCGGCGTGGGGCG
ATTTCGGTTCGAACAATGTCCAATACGACATCATTTCTCCGCTGCCGGGTCTCAGGACGGCGCAATTGCAGTTGGCCCGG
CTTTCTCCATTGCTGCGCGTATCCTACAACCGGTGGATTGAGGTGGGACGCATTCCTTGTGTATCCAGGGTTTGCGAGGC
CCAGCTGGACGTGTCGGGGATTCTCCAGGGGGATGGGGCGGCGCACTGCCCTTTCGGAAGAGCGTTACGCAACATGCGTT
CGTCACTGTTTCATGGTATCAGCGACGAGCGCGGGCACCATGATTGCCTTTACGTCGTCTTCAGTTCAAAGGATAAGCTT
GACGATTCAACATTAATTGCAATGGAAATTCTGCTGCCCTACCTTGATACGGCTTTGCGCCGCGTGACACCCCTGCCGCA
GCACTCCTGCCGGCCCTCCCTCCTCGCAGATGCACCGGAGTATGATCTCCATGGCCTGAGCGAGCGAGAGGTCGAAATAA
TGACCTGGGTAAGAAAGGGCAAAACAAATGCCGAAATCGGCAGTATCCTGCGCATCAGTTCTTACACTGTCAAAAACCAC
CTGCACCAGATATTCCGGAAACTCGATGTCTACAATCGGGTGCAAGCCATTTCCAAAATTGAACAGCGTGTTGGTCATGG
CTGA

Upstream 100 bases:

>100_bases
ATGTAACGGCAGCGCCCGCCCACAATTTACATTCGTTTTATCGCAGTATTAAAGCCTGAGTTATTAACCCATTCAATAAA
CCAATTACTCACAAAATAAA

Downstream 100 bases:

>100_bases
GGCAAATCCTACATTTTCCGCTTCAACCGTTACCGCCCGCCAGGTGAAAGGCCCGCTGGCTAATAATATGCTGAGCGCGG
TCGAGTCGGTACTTGATCCG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MGFFPPFTDDHLQRYFRILQEGTAVRRHFDLLKWLQGEVQHYLPHEILLAAWGDFGSNNVQYDIISPLPGLRTAQLQLAR
LSPLLRVSYNRWIEVGRIPCVSRVCEAQLDVSGILQGDGAAHCPFGRALRNMRSSLFHGISDERGHHDCLYVVFSSKDKL
DDSTLIAMEILLPYLDTALRRVTPLPQHSCRPSLLADAPEYDLHGLSEREVEIMTWVRKGKTNAEIGSILRISSYTVKNH
LHQIFRKLDVYNRVQAISKIEQRVGHG

Sequences:

>Translated_267_residues
MGFFPPFTDDHLQRYFRILQEGTAVRRHFDLLKWLQGEVQHYLPHEILLAAWGDFGSNNVQYDIISPLPGLRTAQLQLAR
LSPLLRVSYNRWIEVGRIPCVSRVCEAQLDVSGILQGDGAAHCPFGRALRNMRSSLFHGISDERGHHDCLYVVFSSKDKL
DDSTLIAMEILLPYLDTALRRVTPLPQHSCRPSLLADAPEYDLHGLSEREVEIMTWVRKGKTNAEIGSILRISSYTVKNH
LHQIFRKLDVYNRVQAISKIEQRVGHG
>Mature_266_residues
GFFPPFTDDHLQRYFRILQEGTAVRRHFDLLKWLQGEVQHYLPHEILLAAWGDFGSNNVQYDIISPLPGLRTAQLQLARL
SPLLRVSYNRWIEVGRIPCVSRVCEAQLDVSGILQGDGAAHCPFGRALRNMRSSLFHGISDERGHHDCLYVVFSSKDKLD
DSTLIAMEILLPYLDTALRRVTPLPQHSCRPSLLADAPEYDLHGLSEREVEIMTWVRKGKTNAEIGSILRISSYTVKNHL
HQIFRKLDVYNRVQAISKIEQRVGHG

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 30505; Mature: 30374

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFPPFTDDHLQRYFRILQEGTAVRRHFDLLKWLQGEVQHYLPHEILLAAWGDFGSNNV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCE
QYDIISPLPGLRTAQLQLARLSPLLRVSYNRWIEVGRIPCVSRVCEAQLDVSGILQGDGA
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEEECCCC
AHCPFGRALRNMRSSLFHGISDERGHHDCLYVVFSSKDKLDDSTLIAMEILLPYLDTALR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
RVTPLPQHSCRPSLLADAPEYDLHGLSEREVEIMTWVRKGKTNAEIGSILRISSYTVKNH
HCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LHQIFRKLDVYNRVQAISKIEQRVGHG
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GFFPPFTDDHLQRYFRILQEGTAVRRHFDLLKWLQGEVQHYLPHEILLAAWGDFGSNNV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCE
QYDIISPLPGLRTAQLQLARLSPLLRVSYNRWIEVGRIPCVSRVCEAQLDVSGILQGDGA
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEEECCCC
AHCPFGRALRNMRSSLFHGISDERGHHDCLYVVFSSKDKLDDSTLIAMEILLPYLDTALR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
RVTPLPQHSCRPSLLADAPEYDLHGLSEREVEIMTWVRKGKTNAEIGSILRISSYTVKNH
HCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LHQIFRKLDVYNRVQAISKIEQRVGHG
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]