| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is mycA [H]
Identifier: 82701365
GI number: 82701365
Start: 244769
End: 246595
Strand: Reverse
Name: mycA [H]
Synonym: Nmul_A0231
Alternate gene names: 82701365
Gene position: 246595-244769 (Counterclockwise)
Preceding gene: 82701366
Following gene: 82701364
Centisome position: 7.74
GC content: 56.05
Gene sequence:
>1827_bases TTGAGTTCAACAATAGCAAAGTTGAACGCTCCGCTGACGCAAGCGTTTAACCCTCAATTATCAAGCGAGCAGCCGGCAGC TGCGATCCCCACACCCACCTACAACACTCAAGCTCAGAGATTAGCCGACTTCGACACCTTGATCGCTGCGCTCGAGTATG CGGCGGCAGGTACAGCCGGATATAACTTTTACGATGCCAAGGGTAATCTCCGCTCTGTTCTTCCCTATCAGGCATTAAGG CAAAATGCCCAAACAGCGGCGCGGCAGTTGCTGCGGCTTGGGTTGGCGAGAGGAGACCGTGTTGCGATTATTGCCGACAC GACGCCGGAGTTCGTGGAGATCTTTTATGCATGCCGCTATGCAGGGCTGGTACCTTATGCAATGCCTGTTCCTGTCAACC TCGGCAGCCATGCGGTTTATGTTCGGCAGTTGCGCGGAATGCTGGAAGCGGGCCAGGCAAGCGCCGCTCTGGCGAACGCC GACTATGTCGATTTCTTGAAAGAAGCGGCCGAGGGGTCCCAATATCTGCGTTGGGTGGGAACGCCGGAGCAACTCGGGGA ACTGCCGGCGTCGATCACCGAGCTTGCGCCAAATAGTCCGGATGAAATCGCATATCTGCAATTTACTTCGGGAAGCACGC GCATGCCCCGTGGAGTAGTAATTACCGAAGGTGCACTAATGAGCAACCTTCAGGGCATTGTCCGTCACGGTCTGAATATC CGGGCAGGAGACCGCTGCGCATCCTGGTTGCCGTTTTATCATGACATGGGCTTGGTTGGCATGGTAATGGCCCCCATGGT GGCGCAAGTTTCCGTTGATTATCTGGCTACCCGTGATTTTGCAATCAGGCCGCTGCAATGGCTGCGGCTGATCAGCAGAA ATCGCGCTACCGTCGCATTCAGCCAACCTTTTGGACTCAAGCTCTGCACGCTTCGCGTGCGCGATTCCGACTTGGAAGAT CTTGACCTCAGCAGTTGGCGTGCAGCGGGAGTCGGCGCGGAAATGATCCGTCCGGACACTTTGAGGAATTTTGCGGAAAA ATTTGCGCCTGCCGGTTTTGACGCGCGCGCATTCCTCCCCTGCTACGGGCTGGCTGAATCGACGCTCGCCGTTACCTTCT CCGAAGTTGGCCAAGGTTTTCAGAGTTTGCGCGTCGACGCGGCAACCCTCGTTGACAGGAAAATGGCGGTACGGTTACAG GTGGAAGGCCGGAAGTATAGTGAATTTGTCAATTGCGGCCGCGCCTTGCCGGGACATATCGTCAAAGTGATCGACGAGGC CGGCCAGCAACTCCCGGATTTGCGAGTAGGCAGCGTACTCGTGCAGGGCAGCAGTATCATGACAGGTTATTTCAACAATC CGGAAGATACCGGCAAAACACTCAAACCCGGAAACTGGCTGGATACCGGTGATCTGGGGTTCCTCTTCGAAGGGGATCTT TACATCACCGGGCGCCGCACCGATGTAATCATCGTCAATGGGCGTAACATCCGCGCGCAGGATATCGAGGAGCTTGCCGA ACAGCAACCTGAAGTGAGAACGCGCGAAGCGTCCGCCTTCGGCATTACTGACGCCAATGACGTCACGACCATTGTCCTGG TCATCGAATGCCGACTTACCTCGATAACGGATCGCCAGTCCCTTACCAGCCGTCTGCAACGTCTGGTCTACATGGCGTTT GGCGTGAATTGTCTGGTGGAACTGGTTCCACCGCACACCCTGCCGCGTACTTCCTCTGGAAAACTGTCCCGTTTTGCGGC CCGCCAGGGCTTTATCCAGCGAACGCAGATGACAGACCAGTTGTCTGCCGAATCCGGGGACAAATAA
Upstream 100 bases:
>100_bases ACGACGCGACAGCGGATGATGGCCAAAAACACGATTGCCCGACTGGAATCCTTTATATTATAAAAAGATGACTAGTACGA TTAACTTGGAGGGGAAGACC
Downstream 100 bases:
>100_bases TCGGGGTATGTCGGAGTCCTGGGTTGCCGTTACCGGCGCCACTGGCTTTATCGGAAATGCTCTGCTGCAGTCCCTGATAA AGGAAGGATGGAAAGTCAGG
Product: acyl-CoA synthetase
Products: NA
Alternate protein names: Glutamate-1-semialdehyde aminotransferase; GSA-AT; ATP-dependent asparagine adenylase 1; AsnA 1; Asparagine activase 1 [H]
Number of amino acids: Translated: 608; Mature: 607
Protein sequence:
>608_residues MSSTIAKLNAPLTQAFNPQLSSEQPAAAIPTPTYNTQAQRLADFDTLIAALEYAAAGTAGYNFYDAKGNLRSVLPYQALR QNAQTAARQLLRLGLARGDRVAIIADTTPEFVEIFYACRYAGLVPYAMPVPVNLGSHAVYVRQLRGMLEAGQASAALANA DYVDFLKEAAEGSQYLRWVGTPEQLGELPASITELAPNSPDEIAYLQFTSGSTRMPRGVVITEGALMSNLQGIVRHGLNI RAGDRCASWLPFYHDMGLVGMVMAPMVAQVSVDYLATRDFAIRPLQWLRLISRNRATVAFSQPFGLKLCTLRVRDSDLED LDLSSWRAAGVGAEMIRPDTLRNFAEKFAPAGFDARAFLPCYGLAESTLAVTFSEVGQGFQSLRVDAATLVDRKMAVRLQ VEGRKYSEFVNCGRALPGHIVKVIDEAGQQLPDLRVGSVLVQGSSIMTGYFNNPEDTGKTLKPGNWLDTGDLGFLFEGDL YITGRRTDVIIVNGRNIRAQDIEELAEQQPEVRTREASAFGITDANDVTTIVLVIECRLTSITDRQSLTSRLQRLVYMAF GVNCLVELVPPHTLPRTSSGKLSRFAARQGFIQRTQMTDQLSAESGDK
Sequences:
>Translated_608_residues MSSTIAKLNAPLTQAFNPQLSSEQPAAAIPTPTYNTQAQRLADFDTLIAALEYAAAGTAGYNFYDAKGNLRSVLPYQALR QNAQTAARQLLRLGLARGDRVAIIADTTPEFVEIFYACRYAGLVPYAMPVPVNLGSHAVYVRQLRGMLEAGQASAALANA DYVDFLKEAAEGSQYLRWVGTPEQLGELPASITELAPNSPDEIAYLQFTSGSTRMPRGVVITEGALMSNLQGIVRHGLNI RAGDRCASWLPFYHDMGLVGMVMAPMVAQVSVDYLATRDFAIRPLQWLRLISRNRATVAFSQPFGLKLCTLRVRDSDLED LDLSSWRAAGVGAEMIRPDTLRNFAEKFAPAGFDARAFLPCYGLAESTLAVTFSEVGQGFQSLRVDAATLVDRKMAVRLQ VEGRKYSEFVNCGRALPGHIVKVIDEAGQQLPDLRVGSVLVQGSSIMTGYFNNPEDTGKTLKPGNWLDTGDLGFLFEGDL YITGRRTDVIIVNGRNIRAQDIEELAEQQPEVRTREASAFGITDANDVTTIVLVIECRLTSITDRQSLTSRLQRLVYMAF GVNCLVELVPPHTLPRTSSGKLSRFAARQGFIQRTQMTDQLSAESGDK >Mature_607_residues SSTIAKLNAPLTQAFNPQLSSEQPAAAIPTPTYNTQAQRLADFDTLIAALEYAAAGTAGYNFYDAKGNLRSVLPYQALRQ NAQTAARQLLRLGLARGDRVAIIADTTPEFVEIFYACRYAGLVPYAMPVPVNLGSHAVYVRQLRGMLEAGQASAALANAD YVDFLKEAAEGSQYLRWVGTPEQLGELPASITELAPNSPDEIAYLQFTSGSTRMPRGVVITEGALMSNLQGIVRHGLNIR AGDRCASWLPFYHDMGLVGMVMAPMVAQVSVDYLATRDFAIRPLQWLRLISRNRATVAFSQPFGLKLCTLRVRDSDLEDL DLSSWRAAGVGAEMIRPDTLRNFAEKFAPAGFDARAFLPCYGLAESTLAVTFSEVGQGFQSLRVDAATLVDRKMAVRLQV EGRKYSEFVNCGRALPGHIVKVIDEAGQQLPDLRVGSVLVQGSSIMTGYFNNPEDTGKTLKPGNWLDTGDLGFLFEGDLY ITGRRTDVIIVNGRNIRAQDIEELAEQQPEVRTREASAFGITDANDVTTIVLVIECRLTSITDRQSLTSRLQRLVYMAFG VNCLVELVPPHTLPRTSSGKLSRFAARQGFIQRTQMTDQLSAESGDK
Specific function: This protein is a multifunctional enzyme, able to activate a long chain fatty acid and link it with the amino acid Asn as part of the synthesis of mycosubtilin. The activation sites consist of individual domains [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI44888818, Length=491, Percent_Identity=25.4582484725051, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI45827692, Length=491, Percent_Identity=26.0692464358452, Blast_Score=90, Evalue=7e-18, Organism=Homo sapiens, GI225735629, Length=491, Percent_Identity=26.0692464358452, Blast_Score=90, Evalue=7e-18, Organism=Homo sapiens, GI156151445, Length=563, Percent_Identity=20.9591474245115, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI55749758, Length=583, Percent_Identity=23.4991423670669, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI225735625, Length=556, Percent_Identity=24.1007194244604, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI145693145, Length=548, Percent_Identity=25.3649635036496, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1788107, Length=562, Percent_Identity=21.7081850533808, Blast_Score=96, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17560308, Length=560, Percent_Identity=22.5, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193202679, Length=548, Percent_Identity=22.992700729927, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17559526, Length=489, Percent_Identity=19.8364008179959, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24581924, Length=401, Percent_Identity=24.9376558603491, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI24654656, Length=601, Percent_Identity=22.6289517470882, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24648260, Length=181, Percent_Identity=32.0441988950276, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI20130357, Length=191, Percent_Identity=31.413612565445, Blast_Score=84, Evalue=4e-16, Organism=Drosophila melanogaster, GI21356441, Length=543, Percent_Identity=22.2836095764273, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI21356947, Length=523, Percent_Identity=22.9445506692161, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI281365686, Length=470, Percent_Identity=22.3404255319149, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24653035, Length=188, Percent_Identity=26.5957446808511, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24656500, Length=198, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR005814 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR023213 - InterPro: IPR001242 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR006162 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00202 Aminotran_3; PF00501 AMP-binding; PF00668 Condensation; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF00550 PP-binding [H]
EC number: NA
Molecular weight: Translated: 66527; Mature: 66395
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTIAKLNAPLTQAFNPQLSSEQPAAAIPTPTYNTQAQRLADFDTLIAALEYAAAGTAG CCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC YNFYDAKGNLRSVLPYQALRQNAQTAARQLLRLGLARGDRVAIIADTTPEFVEIFYACRY CEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH AGLVPYAMPVPVNLGSHAVYVRQLRGMLEAGQASAALANADYVDFLKEAAEGSQYLRWVG HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCEEEECC TPEQLGELPASITELAPNSPDEIAYLQFTSGSTRMPRGVVITEGALMSNLQGIVRHGLNI CHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHCCCCC RAGDRCASWLPFYHDMGLVGMVMAPMVAQVSVDYLATRDFAIRPLQWLRLISRNRATVAF CCCCHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEE SQPFGLKLCTLRVRDSDLEDLDLSSWRAAGVGAEMIRPDTLRNFAEKFAPAGFDARAFLP CCCCCCEEEEEEECCCCCCCCCCCCCHHCCCCHHHCCCHHHHHHHHHHCCCCCCCCEECC CYGLAESTLAVTFSEVGQGFQSLRVDAATLVDRKMAVRLQVEGRKYSEFVNCGRALPGHI CCCCCCHHHEEEHHHHHCCHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHCCCCHHHH VKVIDEAGQQLPDLRVGSVLVQGSSIMTGYFNNPEDTGKTLKPGNWLDTGDLGFLFEGDL HHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCE YITGRRTDVIIVNGRNIRAQDIEELAEQQPEVRTREASAFGITDANDVTTIVLVIECRLT EEECCCEEEEEECCCCCCHHHHHHHHHCCCCHHHCCCCEECCCCCCCCEEEEEEEEECCC SITDRQSLTSRLQRLVYMAFGVNCLVELVPPHTLPRTSSGKLSRFAARQGFIQRTQMTDQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LSAESGDK HCCCCCCC >Mature Secondary Structure SSTIAKLNAPLTQAFNPQLSSEQPAAAIPTPTYNTQAQRLADFDTLIAALEYAAAGTAG CCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC YNFYDAKGNLRSVLPYQALRQNAQTAARQLLRLGLARGDRVAIIADTTPEFVEIFYACRY CEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH AGLVPYAMPVPVNLGSHAVYVRQLRGMLEAGQASAALANADYVDFLKEAAEGSQYLRWVG HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCEEEECC TPEQLGELPASITELAPNSPDEIAYLQFTSGSTRMPRGVVITEGALMSNLQGIVRHGLNI CHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHCCCCC RAGDRCASWLPFYHDMGLVGMVMAPMVAQVSVDYLATRDFAIRPLQWLRLISRNRATVAF CCCCHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEE SQPFGLKLCTLRVRDSDLEDLDLSSWRAAGVGAEMIRPDTLRNFAEKFAPAGFDARAFLP CCCCCCEEEEEEECCCCCCCCCCCCCHHCCCCHHHCCCHHHHHHHHHHCCCCCCCCEECC CYGLAESTLAVTFSEVGQGFQSLRVDAATLVDRKMAVRLQVEGRKYSEFVNCGRALPGHI CCCCCCHHHEEEHHHHHCCHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHCCCCHHHH VKVIDEAGQQLPDLRVGSVLVQGSSIMTGYFNNPEDTGKTLKPGNWLDTGDLGFLFEGDL HHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCE YITGRRTDVIIVNGRNIRAQDIEELAEQQPEVRTREASAFGITDANDVTTIVLVIECRLT EEECCCEEEEEECCCCCCHHHHHHHHHCCCCHHHCCCCEECCCCCCCCEEEEEEEEECCC SITDRQSLTSRLQRLVYMAFGVNCLVELVPPHTLPRTSSGKLSRFAARQGFIQRTQMTDQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LSAESGDK HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10557314 [H]