| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is 82701278
Identifier: 82701278
GI number: 82701278
Start: 150565
End: 152610
Strand: Reverse
Name: 82701278
Synonym: Nmul_A0143
Alternate gene names: NA
Gene position: 152610-150565 (Counterclockwise)
Preceding gene: 82701279
Following gene: 82701274
Centisome position: 4.79
GC content: 54.55
Gene sequence:
>2046_bases ATGACGATACATATATTGCCTGTCAAAGAAAAAGACACAGACTTTATGAATAAGCAACCATTGCAAGACATGCTGCTCCT TCCCCGAATATCAGACATACCAGAGATACCAGAGCCTCAGGATCATGCGGAAGCCACAAGCAACAGCGAAAGTCCCGTTG AAAGTCCTGTTGACAGCCCGGTTGACGCCCCGGCCCCGGGAGAAGCAATAGACGACAGAATAATACACCCCATGCACCTT ACCCGATTTCTGGTCACAAATTTTCGCTCGGTGGAGAACAGTGGCTGGATTGAGGTTGACAGCGTTACCGCGCTCATCGG CGTGAACGAATCCGGCAAGACAAACCTGCTGGTTCCGCTCTGGAAGCTGAATCCGGCAGTCGGGGGAGAGATCGTGCCGG CTTCCGACTACCCGAAAAAACAATTCGGCCCTGTGCGCCAGGCACCGGAAAGCTTCCACTTCATAACGGCGGAATTTGAG GCAGGAGAGCTTGGAGAAGAGCTGTGCGGCAAGCTGGAGATCTCCAGCGAAGAGGCCTCCCTCATCGCTGTGAAACGGTA CTTCAATGGGGATTATTCGATCTCCTTCCCCCGGCGGGAAGAGCTTGGCGAGATCAGGAGATCATCGGGGGAAGAGGCAG AGGATGTTGTGGATACGGTCATCCACTCCCTTCCCAAATTTGTCTATTACTCTGAATTCGGAAATCTCGATTCTGAAATC TATCTTCCCCACGTAGTACAGAATCTTCAACGCACTGACCTTGGGCCCAGAGAAGCAGCCAAGTCGCGTACATTGCGCGT TCTTTTTAAATTCGTAGGCCTCGAGCCGGGAGAAATTCTTGAACTCGGGCGGGACTTTCCAAGGCGCAAGGGCCGTCGTC GTGAACCCACAGTGGAAGAAATCCGGGAAATCGCGATGAAGAAAAGGGAGCGTTCCATCCTGCTGCAATCGGCAGGCGGG CTTCTGACGGAAAAGTTCAGAAACTGGTGGAAGCAGGGAGATTACAAATTCCGCTTCGAAGCGGATGGAAGCCATTTCCG CATATGGGTTTCCGATGACCGCCGCCCGGAGGAAGTTGAGCTCGAAAGCAGAAGCACGGGGCTGCAGTGGTTTCTGAGTT TTTATCTGGTCTTCCTCGTGGAAAGCGGGGGTGAGCACCAGAACGCCGTCTTGTTGCTGGACGAGCCCGGATTGTCCCTG CACCCCCTGGCGCAGCGCAACCTTTTTGCCTTCTTTGACAGTCTTGCAAAAGTCAACAAAATCCTCTACACGACCCATTC ACCATTCCTGCTGGATGCAGAGCACCTGGGACGCGCGCGCAAGGTATATGTTTCCGCGAACGGAACGACGCAAGTGACGT CGGACCTTCGTAGCGTGGAAAAGGATGTCCGGCAGGCGGGAGCCGCCTATGTGGTTCACTCGGCCTTGAACCTGAATATT GCCGAGAGCATGGTAACGGGCTGTCAACCGGTCGTCGTGCAGCGCGTCTCGGATCAATATTATCTCTCGACCATCAAGAC ACTCCTCATTGGGGCAAACAAGATAGCCCCGAAGCGCGAACTGCTCTTTCCGCCGGCTGGCGCCAGCAAAACGGTAGGCG TGATCGCAAGCATCATTAGTGGGCGCGACGAGCCGCTGCCCAAGGTAGTCCTGCGGGATGACGAAGCAGGAAAGCAGATC AATGCAGAGTTGAAGTCGGATTTGTACAGCGACGCGCAGGAGCGTATCTTTTCGACGGATAATTACGTTCTCTTCAGCAA CTCCACGACAGAAGATCTGATACCTGCACCGTTTTTTGCACAAGTAATAGACCGCTGGGAGAGGAATACGGACACGGCCT TTGCGGACGTCCTGGTCAACGGCAAGCCCGTGGTGGCGCAGGTGCAGGCCTGGGCCGAAGCACAGGACCTGGTGTTACGG GATGAATGGAGAGTTGAAGTTGCAAAGCGCGTCAAGGAACAGGCGCTCAAAAAGGGCATCGGCGCGTTTGATGCTGGCAC CATTGCGCGCTGGGCAAAACTCTTTCAGGAGCTGATCCGGAACTGA
Upstream 100 bases:
>100_bases CGGCTTTTTTGGGGGGTTGGCAAGAGTGTCGAAAAGTATTGCAAATTCTGGCTCAACAAACGCTCTTTAAGTACCCGCCC TGAGCAATCAGAGAGTTATA
Downstream 100 bases:
>100_bases TCGCCTCGAATGAATTGCTGCCAATGCTGTCGGCTCCATCGCAAGACGATTTGCAGCACAGAGCAGAAATCCCCTGATTA CTCGCGAAGCAGCTGGTCGA
Product: ATP-dependent OLD family endonuclease
Products: NA
Alternate protein names: ATP-Dependent Endonuclease
Number of amino acids: Translated: 681; Mature: 680
Protein sequence:
>681_residues MTIHILPVKEKDTDFMNKQPLQDMLLLPRISDIPEIPEPQDHAEATSNSESPVESPVDSPVDAPAPGEAIDDRIIHPMHL TRFLVTNFRSVENSGWIEVDSVTALIGVNESGKTNLLVPLWKLNPAVGGEIVPASDYPKKQFGPVRQAPESFHFITAEFE AGELGEELCGKLEISSEEASLIAVKRYFNGDYSISFPRREELGEIRRSSGEEAEDVVDTVIHSLPKFVYYSEFGNLDSEI YLPHVVQNLQRTDLGPREAAKSRTLRVLFKFVGLEPGEILELGRDFPRRKGRRREPTVEEIREIAMKKRERSILLQSAGG LLTEKFRNWWKQGDYKFRFEADGSHFRIWVSDDRRPEEVELESRSTGLQWFLSFYLVFLVESGGEHQNAVLLLDEPGLSL HPLAQRNLFAFFDSLAKVNKILYTTHSPFLLDAEHLGRARKVYVSANGTTQVTSDLRSVEKDVRQAGAAYVVHSALNLNI AESMVTGCQPVVVQRVSDQYYLSTIKTLLIGANKIAPKRELLFPPAGASKTVGVIASIISGRDEPLPKVVLRDDEAGKQI NAELKSDLYSDAQERIFSTDNYVLFSNSTTEDLIPAPFFAQVIDRWERNTDTAFADVLVNGKPVVAQVQAWAEAQDLVLR DEWRVEVAKRVKEQALKKGIGAFDAGTIARWAKLFQELIRN
Sequences:
>Translated_681_residues MTIHILPVKEKDTDFMNKQPLQDMLLLPRISDIPEIPEPQDHAEATSNSESPVESPVDSPVDAPAPGEAIDDRIIHPMHL TRFLVTNFRSVENSGWIEVDSVTALIGVNESGKTNLLVPLWKLNPAVGGEIVPASDYPKKQFGPVRQAPESFHFITAEFE AGELGEELCGKLEISSEEASLIAVKRYFNGDYSISFPRREELGEIRRSSGEEAEDVVDTVIHSLPKFVYYSEFGNLDSEI YLPHVVQNLQRTDLGPREAAKSRTLRVLFKFVGLEPGEILELGRDFPRRKGRRREPTVEEIREIAMKKRERSILLQSAGG LLTEKFRNWWKQGDYKFRFEADGSHFRIWVSDDRRPEEVELESRSTGLQWFLSFYLVFLVESGGEHQNAVLLLDEPGLSL HPLAQRNLFAFFDSLAKVNKILYTTHSPFLLDAEHLGRARKVYVSANGTTQVTSDLRSVEKDVRQAGAAYVVHSALNLNI AESMVTGCQPVVVQRVSDQYYLSTIKTLLIGANKIAPKRELLFPPAGASKTVGVIASIISGRDEPLPKVVLRDDEAGKQI NAELKSDLYSDAQERIFSTDNYVLFSNSTTEDLIPAPFFAQVIDRWERNTDTAFADVLVNGKPVVAQVQAWAEAQDLVLR DEWRVEVAKRVKEQALKKGIGAFDAGTIARWAKLFQELIRN >Mature_680_residues TIHILPVKEKDTDFMNKQPLQDMLLLPRISDIPEIPEPQDHAEATSNSESPVESPVDSPVDAPAPGEAIDDRIIHPMHLT RFLVTNFRSVENSGWIEVDSVTALIGVNESGKTNLLVPLWKLNPAVGGEIVPASDYPKKQFGPVRQAPESFHFITAEFEA GELGEELCGKLEISSEEASLIAVKRYFNGDYSISFPRREELGEIRRSSGEEAEDVVDTVIHSLPKFVYYSEFGNLDSEIY LPHVVQNLQRTDLGPREAAKSRTLRVLFKFVGLEPGEILELGRDFPRRKGRRREPTVEEIREIAMKKRERSILLQSAGGL LTEKFRNWWKQGDYKFRFEADGSHFRIWVSDDRRPEEVELESRSTGLQWFLSFYLVFLVESGGEHQNAVLLLDEPGLSLH PLAQRNLFAFFDSLAKVNKILYTTHSPFLLDAEHLGRARKVYVSANGTTQVTSDLRSVEKDVRQAGAAYVVHSALNLNIA ESMVTGCQPVVVQRVSDQYYLSTIKTLLIGANKIAPKRELLFPPAGASKTVGVIASIISGRDEPLPKVVLRDDEAGKQIN AELKSDLYSDAQERIFSTDNYVLFSNSTTEDLIPAPFFAQVIDRWERNTDTAFADVLVNGKPVVAQVQAWAEAQDLVLRD EWRVEVAKRVKEQALKKGIGAFDAGTIARWAKLFQELIRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76539; Mature: 76407
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIHILPVKEKDTDFMNKQPLQDMLLLPRISDIPEIPEPQDHAEATSNSESPVESPVDSP CEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC VDAPAPGEAIDDRIIHPMHLTRFLVTNFRSVENSGWIEVDSVTALIGVNESGKTNLLVPL CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCCCCCCEEEEE WKLNPAVGGEIVPASDYPKKQFGPVRQAPESFHFITAEFEAGELGEELCGKLEISSEEAS EECCCCCCCEEECCCCCCHHHCCCHHCCCCCCEEEEEECCCHHHHHHHHCCEEECCCCHH LIAVKRYFNGDYSISFPRREELGEIRRSSGEEAEDVVDTVIHSLPKFVYYSEFGNLDSEI EEEEHHHHCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE YLPHVVQNLQRTDLGPREAAKSRTLRVLFKFVGLEPGEILELGRDFPRRKGRRREPTVEE ECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHCCCCCCCCHHH IREIAMKKRERSILLQSAGGLLTEKFRNWWKQGDYKFRFEADGSHFRIWVSDDRRPEEVE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCEE LESRSTGLQWFLSFYLVFLVESGGEHQNAVLLLDEPGLSLHPLAQRNLFAFFDSLAKVNK CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH ILYTTHSPFLLDAEHLGRARKVYVSANGTTQVTSDLRSVEKDVRQAGAAYVVHSALNLNI HEEECCCCCEEEHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHH AESMVTGCQPVVVQRVSDQYYLSTIKTLLIGANKIAPKRELLFPPAGASKTVGVIASIIS HHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHEECCCCCCCHHHHHHHHHHC GRDEPLPKVVLRDDEAGKQINAELKSDLYSDAQERIFSTDNYVLFSNSTTEDLIPAPFFA CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHH QVIDRWERNTDTAFADVLVNGKPVVAQVQAWAEAQDLVLRDEWRVEVAKRVKEQALKKGI HHHHHHHCCCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GAFDAGTIARWAKLFQELIRN CCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIHILPVKEKDTDFMNKQPLQDMLLLPRISDIPEIPEPQDHAEATSNSESPVESPVDSP EEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC VDAPAPGEAIDDRIIHPMHLTRFLVTNFRSVENSGWIEVDSVTALIGVNESGKTNLLVPL CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCCCCCCEEEEE WKLNPAVGGEIVPASDYPKKQFGPVRQAPESFHFITAEFEAGELGEELCGKLEISSEEAS EECCCCCCCEEECCCCCCHHHCCCHHCCCCCCEEEEEECCCHHHHHHHHCCEEECCCCHH LIAVKRYFNGDYSISFPRREELGEIRRSSGEEAEDVVDTVIHSLPKFVYYSEFGNLDSEI EEEEHHHHCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE YLPHVVQNLQRTDLGPREAAKSRTLRVLFKFVGLEPGEILELGRDFPRRKGRRREPTVEE ECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHCCCCCCCCHHH IREIAMKKRERSILLQSAGGLLTEKFRNWWKQGDYKFRFEADGSHFRIWVSDDRRPEEVE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCEE LESRSTGLQWFLSFYLVFLVESGGEHQNAVLLLDEPGLSLHPLAQRNLFAFFDSLAKVNK CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH ILYTTHSPFLLDAEHLGRARKVYVSANGTTQVTSDLRSVEKDVRQAGAAYVVHSALNLNI HEEECCCCCEEEHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHH AESMVTGCQPVVVQRVSDQYYLSTIKTLLIGANKIAPKRELLFPPAGASKTVGVIASIIS HHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHEECCCCCCCHHHHHHHHHHC GRDEPLPKVVLRDDEAGKQINAELKSDLYSDAQERIFSTDNYVLFSNSTTEDLIPAPFFA CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHH QVIDRWERNTDTAFADVLVNGKPVVAQVQAWAEAQDLVLRDEWRVEVAKRVKEQALKKGI HHHHHHHCCCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GAFDAGTIARWAKLFQELIRN CCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA