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The map label for this gene is yicC [C]

Identifier: 82701200

GI number: 82701200

Start: 71155

End: 72048

Strand: Reverse

Name: yicC [C]

Synonym: Nmul_A0065

Alternate gene names: 82701200

Gene position: 72048-71155 (Counterclockwise)

Preceding gene: 82701204

Following gene: 82701199

Centisome position: 2.26

GC content: 54.36

Gene sequence:

>894_bases
GTGGATGATCGAGTGGACAAGTTAGCCAAGATCTACAGCATGACCGGCTATGCCGTAGTCGCGAAGGAACTCCCGCAAGG
ATCGTTGAATCTCGAGCTTCGCTCGGTCAACAGCCGTTATCTCGATATCCAGTTTCGCCTTCCCGACGAATTCCGCATGC
TGGAAACCGCAATGCGCGAATTTCTGACCACCCGCCTCAAGCGTGGAAAAATCGAATGCCGCGTCAGTTTTTCCCGGATT
ACACCTGCGGAAGATTTGCAGCATATTAATGCGGATTTGTTGCAAAAACTGCTGGAACTGGACCGTACCGTCAGGGCGGT
ATTGCCCGAGGCTCGGGGCCTGGCGGTGGCAGATGTCCTTCGTTGGCCCGGAATATTGGCGACGGAATCCTCCTCCGCCG
AGAACTTTTTCGGGCCATGCATGGACTTGATGCATGCGGCAGTGGACGAACTGGCCGCTGCCCGTGGGCGCGAAGGTGCA
AAACTTAAAGCTATTTTGCTGGACCGCCTGGGCAATATGCGCCGGCTCGCATCCGAAGTCAGTCCATCCATTCCTGCCTT
GCTGGCGACATTTCAGGAAAAGCTCAAGGCTAGACTGCGTGAAGCCATGATAAATTGCGACGACGAGCGCATCCGCCAGG
AATTGACATTGTTCGCCAGCAAGATCGATGTGGATGAGGAACTGTCGCGCCTTCAGGCACACTTCGATGAAGTGGAGCGC
GTTCTGGAGAAAGGCGGAGCGATCGGCAAGCGACTGGATTTTTTGATGCAGGAACTCAACCGGGAAGCCAATACCATCGG
CGCGAAATCGGTGGATGCGGAAGTGTCGAAAATTTCGGTGGAACTCAAGGTTTTGATCGAGCAAATGCGGGAACAGGTGC
AAAACATTGAGTGA

Upstream 100 bases:

>100_bases
CTTTTCCACTGCACGGAAACACCAACTCGTTTCCTTTATATGCAGCAACGATATGCGATAATGCCTGGGCCCACAATTTT
AACGCATCAAGGACCTTCGA

Downstream 100 bases:

>100_bases
TATTTCACAGAGACTCAGGCAGTCTCAAATTTTCCTCATAACTTCCTCAAAGCCGCTATTCATGCGGCTTTTTTCATTTC
AGTTCATTGCAATTCATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MDDRVDKLAKIYSMTGYAVVAKELPQGSLNLELRSVNSRYLDIQFRLPDEFRMLETAMREFLTTRLKRGKIECRVSFSRI
TPAEDLQHINADLLQKLLELDRTVRAVLPEARGLAVADVLRWPGILATESSSAENFFGPCMDLMHAAVDELAAARGREGA
KLKAILLDRLGNMRRLASEVSPSIPALLATFQEKLKARLREAMINCDDERIRQELTLFASKIDVDEELSRLQAHFDEVER
VLEKGGAIGKRLDFLMQELNREANTIGAKSVDAEVSKISVELKVLIEQMREQVQNIE

Sequences:

>Translated_297_residues
MDDRVDKLAKIYSMTGYAVVAKELPQGSLNLELRSVNSRYLDIQFRLPDEFRMLETAMREFLTTRLKRGKIECRVSFSRI
TPAEDLQHINADLLQKLLELDRTVRAVLPEARGLAVADVLRWPGILATESSSAENFFGPCMDLMHAAVDELAAARGREGA
KLKAILLDRLGNMRRLASEVSPSIPALLATFQEKLKARLREAMINCDDERIRQELTLFASKIDVDEELSRLQAHFDEVER
VLEKGGAIGKRLDFLMQELNREANTIGAKSVDAEVSKISVELKVLIEQMREQVQNIE
>Mature_297_residues
MDDRVDKLAKIYSMTGYAVVAKELPQGSLNLELRSVNSRYLDIQFRLPDEFRMLETAMREFLTTRLKRGKIECRVSFSRI
TPAEDLQHINADLLQKLLELDRTVRAVLPEARGLAVADVLRWPGILATESSSAENFFGPCMDLMHAAVDELAAARGREGA
KLKAILLDRLGNMRRLASEVSPSIPALLATFQEKLKARLREAMINCDDERIRQELTLFASKIDVDEELSRLQAHFDEVER
VLEKGGAIGKRLDFLMQELNREANTIGAKSVDAEVSKISVELKVLIEQMREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=41.1149825783972, Blast_Score=216, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33595; Mature: 33595

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRVDKLAKIYSMTGYAVVAKELPQGSLNLELRSVNSRYLDIQFRLPDEFRMLETAMRE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHH
FLTTRLKRGKIECRVSFSRITPAEDLQHINADLLQKLLELDRTVRAVLPEARGLAVADVL
HHHHHHHCCCEEEEEEHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCHHHHHHH
RWPGILATESSSAENFFGPCMDLMHAAVDELAAARGREGAKLKAILLDRLGNMRRLASEV
HCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SPSIPALLATFQEKLKARLREAMINCDDERIRQELTLFASKIDVDEELSRLQAHFDEVER
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VLEKGGAIGKRLDFLMQELNREANTIGAKSVDAEVSKISVELKVLIEQMREQVQNIE
HHHHCCCHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDDRVDKLAKIYSMTGYAVVAKELPQGSLNLELRSVNSRYLDIQFRLPDEFRMLETAMRE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHH
FLTTRLKRGKIECRVSFSRITPAEDLQHINADLLQKLLELDRTVRAVLPEARGLAVADVL
HHHHHHHCCCEEEEEEHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCHHHHHHH
RWPGILATESSSAENFFGPCMDLMHAAVDELAAARGREGAKLKAILLDRLGNMRRLASEV
HCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SPSIPALLATFQEKLKARLREAMINCDDERIRQELTLFASKIDVDEELSRLQAHFDEVER
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VLEKGGAIGKRLDFLMQELNREANTIGAKSVDAEVSKISVELKVLIEQMREQVQNIE
HHHHCCCHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]