Click here to switch to the map view.

The map label for this gene is yqhA [C]

Identifier: 82701151

GI number: 82701151

Start: 16151

End: 16798

Strand: Reverse

Name: yqhA [C]

Synonym: Nmul_A0016

Alternate gene names: 82701151

Gene position: 16798-16151 (Counterclockwise)

Preceding gene: 82701160

Following gene: 82701143

Centisome position: 0.53

GC content: 51.54

Gene sequence:

>648_bases
ATGAAAATCAACGAGGACTCTAACGATACCAACGATACCCCACTGCCCGTCTACTCCGGGAGATCAAGAAAGATCCAGCC
GCTGGCATATTTCATATTTACCACACGCTGGCTGCAATTGCCCCTGTACCTTGGGCTGATTCTTGCGCAATGCGTCTACG
TTTATCACTTCTGGGTGGAATTACTTGACCTGATCGGAGCAGTGATGGGTAACAAGGAGGCGCTGGAGCACACCCTGGAT
GCGGTTTCGATCGAGGGCGCCGCTCCACCCAAGAAGATCGGGGAAACGACGATCATGCTGGTCGTACTGGGTCTGATCGA
CGTGGTGATGATCTCCAACCTGCTCATCATGGTAATCATCGGAGGCTATGAGACTTTTGTCTCCCGCATGAATCTGGAAG
GACACCCCGATCAGCCGGAATGGTTATCACATGTCAACGCAACGGTGCTGAAAGTCAAGCTTTCCACCGCTATTATCGGC
ATTTCTTCCATTCATCTGCTGAAGACATTCATCAACGCCAATGCATATGATGAGAAAACGATCCTGGCCCAGACCGGAAT
CCACATAGTTTTCCTGTTGTCCGCAATCGCAATTGCCTATAGTGACCGGCTGATGTCCCGTCCTGGCGGGCACGAGAGCG
ATCATTGA

Upstream 100 bases:

>100_bases
TATGTCGACAGACTGTCGAAACCCCATGAACGATGTGCGCAACGAAACAGCCGGCGTGTAAAATAGCGGCTATTTCTCAC
CGCAAAATCCACAGAATTGA

Downstream 100 bases:

>100_bases
GCAACGGGGAGTTATGCGACGGCGGGCGGGATACTGTGTAGCAGATCGATCAGGCCTTGCAGCGCTCCCGATACGGATTG
GCGCCTTATCTCCTCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKINEDSNDTNDTPLPVYSGRSRKIQPLAYFIFTTRWLQLPLYLGLILAQCVYVYHFWVELLDLIGAVMGNKEALEHTLD
AVSIEGAAPPKKIGETTIMLVVLGLIDVVMISNLLIMVIIGGYETFVSRMNLEGHPDQPEWLSHVNATVLKVKLSTAIIG
ISSIHLLKTFINANAYDEKTILAQTGIHIVFLLSAIAIAYSDRLMSRPGGHESDH

Sequences:

>Translated_215_residues
MKINEDSNDTNDTPLPVYSGRSRKIQPLAYFIFTTRWLQLPLYLGLILAQCVYVYHFWVELLDLIGAVMGNKEALEHTLD
AVSIEGAAPPKKIGETTIMLVVLGLIDVVMISNLLIMVIIGGYETFVSRMNLEGHPDQPEWLSHVNATVLKVKLSTAIIG
ISSIHLLKTFINANAYDEKTILAQTGIHIVFLLSAIAIAYSDRLMSRPGGHESDH
>Mature_215_residues
MKINEDSNDTNDTPLPVYSGRSRKIQPLAYFIFTTRWLQLPLYLGLILAQCVYVYHFWVELLDLIGAVMGNKEALEHTLD
AVSIEGAAPPKKIGETTIMLVVLGLIDVVMISNLLIMVIIGGYETFVSRMNLEGHPDQPEWLSHVNATVLKVKLSTAIIG
ISSIHLLKTFINANAYDEKTILAQTGIHIVFLLSAIAIAYSDRLMSRPGGHESDH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=173, Percent_Identity=31.2138728323699, Blast_Score=98, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 23843; Mature: 23843

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINEDSNDTNDTPLPVYSGRSRKIQPLAYFIFTTRWLQLPLYLGLILAQCVYVYHFWVE
CCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDLIGAVMGNKEALEHTLDAVSIEGAAPPKKIGETTIMLVVLGLIDVVMISNLLIMVII
HHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGYETFVSRMNLEGHPDQPEWLSHVNATVLKVKLSTAIIGISSIHLLKTFINANAYDEKT
CCHHHHHHHCCCCCCCCCHHHHHHCCHHHEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHH
ILAQTGIHIVFLLSAIAIAYSDRLMSRPGGHESDH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKINEDSNDTNDTPLPVYSGRSRKIQPLAYFIFTTRWLQLPLYLGLILAQCVYVYHFWVE
CCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDLIGAVMGNKEALEHTLDAVSIEGAAPPKKIGETTIMLVVLGLIDVVMISNLLIMVII
HHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGYETFVSRMNLEGHPDQPEWLSHVNATVLKVKLSTAIIGISSIHLLKTFINANAYDEKT
CCHHHHHHHCCCCCCCCCHHHHHHCCHHHEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHH
ILAQTGIHIVFLLSAIAIAYSDRLMSRPGGHESDH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]