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The map label for this gene is yjjN [H]

Identifier: 82546711

GI number: 82546711

Start: 4473453

End: 4474490

Strand: Direct

Name: yjjN [H]

Synonym: SBO_4418

Alternate gene names: 82546711

Gene position: 4473453-4474490 (Clockwise)

Preceding gene: 82546709

Following gene: 82546718

Centisome position: 98.97

GC content: 50.77

Gene sequence:

>1038_bases
ATGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGAAACAACGCGAGAT
ACCTATTCCGGGTGACAATGAAGCATTAATAAAAATTAAGTCTGTCGGGATTTGCGGTACCGATATTCATGCCTGGGGTG
GAAATCAACCATTTTTTAGTTATCCACGTGTTTTAGGCCATGAAATATGTGGGGAGATTGTTAGGCTGGGTAAAAATATT
GCTGATCTTAAAAATGGTCTGCAAGTTGCTGTGATCCCTTATGTTGCCTGTCAGCAATGCCCGGCGTGTAAAAGCGGGCG
TACCAATTGCTGTGAAAAAATTTCAGTCATTGGCGTGCATCAGGATGGCGGTTTTAGTGAGTATTTGAGCGTGCCGGTGG
CGAACATTTTGCCCGCAGACGGTATTGACCCGCAGGCGGCAGCATTGATTGAACCTTTCGCTATTAGCGCTCATGCGGTG
CGTCGCGCAGCCATTGCTCCCGGCGAGCAGGTGCTGGTGGTCGGGGCGGGGCCAATCGGTCTGGGCGCGGCGGCAATCGC
TAAAGCCGATGGCGCACAGGTGGTGGTGGCGGATACCAGTCCGGCGCGCCGTGAACATGTGGCAACGCGTCTGGAATTAC
CTTTACTGGACCCGTCAGCCGAAGATTTTGACGCGCAGCTACGGGCGCAGTTTGGTGGTTCGCTGGCGCAGAAAGTGATC
GACGCGACAGGTAATCAACATGCGATGAATAACACCGTGAATTTGATTCGTCACGGCGGCACGGTGGTATTTGTCGGCCT
GTTTAAAGGTGAGTTGCAGTTCTCCGATCCGGAATTCCATAAAAAAGAAACGACGATGATGGGTAGCCGCAACGCCACGC
CGGAAGATTTTGCTAAAGTCGGTCGACTGATGGCGGAAGGAAAAATCACTGCTGACATGATGTTAACCCATCGCTATCCG
TTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTGATTAAGGGTGTAATTACTTTCTGA

Upstream 100 bases:

>100_bases
AAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAACAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATT
GATATCTAAGGCAACAAAAA

Downstream 100 bases:

>100_bases
TAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTCTGTTTCTCAATGATGTTT
TGTAGGCCGCAGAAGGTGTG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MESRIMSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVRLGKNI
ADLKNGLQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAV
RRAAIAPGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSLAQKVI
DATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYP
FATLAETYERDVINNRELIKGVITF

Sequences:

>Translated_345_residues
MESRIMSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVRLGKNI
ADLKNGLQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAV
RRAAIAPGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSLAQKVI
DATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYP
FATLAETYERDVINNRELIKGVITF
>Mature_345_residues
MESRIMSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVRLGKNI
ADLKNGLQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAV
RRAAIAPGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSLAQKVI
DATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYP
FATLAETYERDVINNRELIKGVITF

Specific function: Putative L-galactonate oxidoreductase that is required for growth on L-galactonate as the sole carbon source [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI156627571, Length=335, Percent_Identity=31.9402985074627, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI262073058, Length=384, Percent_Identity=23.6979166666667, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI71743840, Length=391, Percent_Identity=24.0409207161125, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4501929, Length=386, Percent_Identity=24.3523316062176, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI34577061, Length=382, Percent_Identity=24.0837696335079, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI71565154, Length=220, Percent_Identity=26.8181818181818, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4501933, Length=382, Percent_Identity=23.2984293193717, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI4501939, Length=374, Percent_Identity=23.2620320855615, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI156523966, Length=374, Percent_Identity=23.2620320855615, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI226510992, Length=340, Percent_Identity=99.4117647058823, Blast_Score=697, Evalue=0.0,
Organism=Escherichia coli, GI1787863, Length=343, Percent_Identity=31.7784256559767, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1788073, Length=343, Percent_Identity=29.1545189504373, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1790045, Length=330, Percent_Identity=29.3939393939394, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1788407, Length=318, Percent_Identity=29.874213836478, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1788075, Length=347, Percent_Identity=27.3775216138329, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1790718, Length=305, Percent_Identity=28.8524590163934, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI87082125, Length=324, Percent_Identity=27.4691358024691, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1786825, Length=385, Percent_Identity=26.7532467532467, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI87081918, Length=312, Percent_Identity=28.8461538461538, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1786552, Length=216, Percent_Identity=29.1666666666667, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1786518, Length=257, Percent_Identity=28.4046692607004, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17562876, Length=325, Percent_Identity=29.8461538461538, Blast_Score=138, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17562878, Length=336, Percent_Identity=28.5714285714286, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71988145, Length=328, Percent_Identity=27.7439024390244, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17562584, Length=298, Percent_Identity=29.5302013422819, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17562582, Length=324, Percent_Identity=27.7777777777778, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25146526, Length=356, Percent_Identity=24.438202247191, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71997431, Length=358, Percent_Identity=23.463687150838, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565904, Length=347, Percent_Identity=24.207492795389, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322619, Length=346, Percent_Identity=28.0346820809249, Blast_Score=139, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6319955, Length=346, Percent_Identity=27.7456647398844, Blast_Score=136, Evalue=4e-33,
Organism=Saccharomyces cerevisiae, GI6323099, Length=354, Percent_Identity=29.0960451977401, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6319257, Length=358, Percent_Identity=29.0502793296089, Blast_Score=128, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6319621, Length=267, Percent_Identity=31.4606741573034, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6319258, Length=327, Percent_Identity=26.2996941896024, Blast_Score=103, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6323961, Length=341, Percent_Identity=28.7390029325513, Blast_Score=103, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6324486, Length=333, Percent_Identity=29.7297297297297, Blast_Score=102, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6323729, Length=345, Percent_Identity=27.2463768115942, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6320033, Length=361, Percent_Identity=23.8227146814404, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6323980, Length=185, Percent_Identity=32.972972972973, Blast_Score=71, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6319949, Length=262, Percent_Identity=27.8625954198473, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17737897, Length=323, Percent_Identity=33.1269349845201, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI17137530, Length=323, Percent_Identity=31.8885448916409, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI17737895, Length=387, Percent_Identity=24.2894056847545, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI45550770, Length=320, Percent_Identity=26.875, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI45551930, Length=320, Percent_Identity=26.875, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI221457811, Length=320, Percent_Identity=26.875, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR002328
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 37149; Mature: 37149

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00059 ADH_ZINC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESRIMSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFS
CCCHHHHHHHHHEECCCHHHHHHCCCCCCCCCCCEEEEEEECCEECCCEECCCCCCCCHH
YPRVLGHEICGEIVRLGKNIADLKNGLQVAVIPYVACQQCPACKSGRTNCCEKISVIGVH
HHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEECHHHHHCCCCCCCCCCHHHHCEEEEEEE
QDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAIAPGEQVLVVGAGPIG
CCCCHHHHHHCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
LGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSLAQKVI
CCHHHHHCCCCCEEEEECCCCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCHHHHHHHH
DATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKV
HCCCCCHHHHHHHHHHCCCCEEEEEEEEECEEECCCCCHHHHHHHHCCCCCCCHHHHHHH
GRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELIKGVITF
HHHHHCCCCEEEEHEECCCCHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MESRIMSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFS
CCCHHHHHHHHHEECCCHHHHHHCCCCCCCCCCCEEEEEEECCEECCCEECCCCCCCCHH
YPRVLGHEICGEIVRLGKNIADLKNGLQVAVIPYVACQQCPACKSGRTNCCEKISVIGVH
HHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEECHHHHHCCCCCCCCCCHHHHCEEEEEEE
QDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAIAPGEQVLVVGAGPIG
CCCCHHHHHHCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
LGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSLAQKVI
CCHHHHHCCCCCEEEEECCCCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCHHHHHHHH
DATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKV
HCCCCCHHHHHHHHHHCCCCEEEEEEEEECEEECCCCCHHHHHHHHCCCCCCCHHHHHHH
GRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELIKGVITF
HHHHHCCCCEEEEHEECCCCHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]