Click here to switch to the map view.

The map label for this gene is yjiH

Identifier: 82546677

GI number: 82546677

Start: 4433942

End: 4434289

Strand: Reverse

Name: yjiH

Synonym: SBO_4381

Alternate gene names: 82546677

Gene position: 4434289-4433942 (Counterclockwise)

Preceding gene: 82546679

Following gene: 82546676

Centisome position: 98.11

GC content: 52.87

Gene sequence:

>348_bases
ATGACACCTGTGCTAAAACCGTTGTTGGGCATTCCAGGGATCTGCTCGCTGGCGCTGATCGCTAACTTGCAAAACACTGA
TGCCGCCGCCGGTATGACCAAAGAGCTGGCGCAGGAAGGTGAAATTACCGAACGCGATAAAGTGATTTTCGCCGCATATC
AAACCAGCGGTAGCGCCATCATCACCAACTACTTCTCTTCCGGCGTCGCGGTGTTCGCCTTTCTGGGCACGTCCGTAATC
GTACCTTTAGCCGTCATCCTGGTGTTTAAATTTGTCGGAGCCAACATTTTGCGCGTCTGGCTTAACTTCGAAGAACGTCG
CAACCCAACGCAAGGAGCGCAAGCATGA

Upstream 100 bases:

>100_bases
CTTTCTCTTTGCGCTGGAGCTGGCACCGTCAGTCATTCTCTCTCTGGGGATTATTTCAATTACCGATGGTCTTGGTGGAT
TACGCGCCGCGCAGCAGTTA

Downstream 100 bases:

>100_bases
CAACTCAGGTCCGCAAAAACGTCATGGATATGTTTATCGATGGCGCGCGCCGTGGCTTTACTATCGCCACGACCAACCTG
CTGCCAAACGTGGTGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAIITNYFSSGVAVFAFLGTSVI
VPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA

Sequences:

>Translated_115_residues
MTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAIITNYFSSGVAVFAFLGTSVI
VPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA
>Mature_114_residues
TPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAIITNYFSSGVAVFAFLGTSVIV
PLAVILVFKFVGANILRVWLNFEERRNPTQGAQA

Specific function: Unknown

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082423, Length=115, Percent_Identity=100, Blast_Score=232, Evalue=5e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJIH_ECOLI (P39379)

Other databases:

- EMBL:   U14003
- EMBL:   U00096
- EMBL:   AP009048
- RefSeq:   AP_004822.1
- RefSeq:   NP_418750.2
- ProteinModelPortal:   P39379
- STRING:   P39379
- EnsemblBacteria:   EBESCT00000004668
- EnsemblBacteria:   EBESCT00000015945
- GeneID:   948856
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5783
- KEGG:   eco:b4330
- EchoBASE:   EB2457
- EcoGene:   EG12569
- eggNOG:   COG3314
- GeneTree:   EBGT00050000010512
- HOGENOM:   HBG416621
- OMA:   QSNEWYG
- ProtClustDB:   CLSK869878
- BioCyc:   EcoCyc:G7927-MONOMER
- Genevestigator:   P39379
- InterPro:   IPR011642

Pfam domain/function: PF07670 Gate

EC number: NA

Molecular weight: Translated: 12271; Mature: 12140

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1dfa4ab0)-; HASH(0x1e0500ec)-; HASH(0x1d4498e0)-; HASH(0x1c46d370)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAI
CCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCH
ITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCH
>Mature Secondary Structure 
TPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAI
CCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCH
ITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503