| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is fimG [H]
Identifier: 82546665
GI number: 82546665
Start: 4422066
End: 4422569
Strand: Direct
Name: fimG [H]
Synonym: SBO_4369
Alternate gene names: 82546665
Gene position: 4422066-4422569 (Clockwise)
Preceding gene: 82546664
Following gene: 82546666
Centisome position: 97.84
GC content: 52.38
Gene sequence:
>504_bases ATGAAATGGCGCAAACGTGGGTATTTATTGGCGGCAATATTGGCGCTCGCAAGTGCGACAATACAGGCAGCCGATGTCAC CATCACGGTGAACGGTAAGGTCGTCGCCAAACCGTGCACAGTTTCCACCACCAATGCCACGGTTGATCTCGGCGATCTTT ATTCTTTCAGTCTGATGTCTGCCGGGGCGGCATCGGCCTGGCATGATGTTGCGCTTGAGTTGACTAATTGTCCGGTGGGA ACGTCGAGGGTCACTGCCAGCTTCAGCGGGGCAGCCGACAGTACCGGATATTATAAAAACCAGGGGACCGCGCAAAACAT CCAGTTAGAGCTACAGGATGACAGTGGCAACACATTGAATACTGGCGAAACCAAAACAGTTCAGGTGGATGATTCCTCAC AATCAGCGCACTTCCCGTTACAGGTCAGAGCATTGACGGTAAATGGCGGAGCCACTCAGGGAACCATTCAGGCAGTGATT AGCATCACCTATACCTACAGCTGA
Upstream 100 bases:
>100_bases TTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAAT ATCAGTAACTGGAGATGCTC
Downstream 100 bases:
>100_bases ACCCGAAGAGATAATTGTAATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGT CATTCGCCTGTAAAACCGCC
Product: fimbrial morphology
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVG TSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGETKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI SITYTYS
Sequences:
>Translated_167_residues MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVG TSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGETKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI SITYTYS >Mature_167_residues MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVG TSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGETKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI SITYTYS
Specific function: Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Involved in the integration of fimH in the fimbriae [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Fimbrium [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fimbrial protein family [H]
Homologues:
Organism=Escherichia coli, GI1790774, Length=167, Percent_Identity=98.2035928143712, Blast_Score=330, Evalue=3e-92, Organism=Escherichia coli, GI1787780, Length=166, Percent_Identity=57.8313253012048, Blast_Score=205, Evalue=1e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008966 - InterPro: IPR000259 - InterPro: IPR014779 [H]
Pfam domain/function: PF00419 Fimbrial [H]
EC number: NA
Molecular weight: Translated: 17443; Mature: 17443
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMS CCCCCCCHHHHHHHHHHHCEEEEEEEEEEECCEEEECCCEEECCCCEEECCCCCEEHHHC AGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLN CCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCEECCCCCCEEEEEEEECCCCCEEC TGETKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS CCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMS CCCCCCCHHHHHHHHHHHCEEEEEEEEEEECCEEEECCCEEECCCCEEECCCCCEEHHHC AGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLN CCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCEECCCCCCEEEEEEEECCCCCEEC TGETKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS CCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2890081; 7610040; 9278503 [H]