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The map label for this gene is yjcS [H]

Identifier: 82546425

GI number: 82546425

Start: 4160426

End: 4162423

Strand: Reverse

Name: yjcS [H]

Synonym: SBO_4115

Alternate gene names: 82546425

Gene position: 4162423-4160426 (Counterclockwise)

Preceding gene: 82546428

Following gene: 82546424

Centisome position: 92.09

GC content: 51.95

Gene sequence:

>1998_bases
ATGGAGATTTATATGAATAACTCTCGGTTATTCCGTTTGAGCAGAATTGTTATTGCGTTAACTGCCGCCAGCGGCATGAT
GGTAAATACCGCTAACGCGAAAGAGGAAGCGAAAGCCGCCACTCAATATACCCAACAGGTTAATCAGAATTACGCCAAAT
CATTACCGTTTAGCGATCGTCAGGATTTTGACGACGCTCAGCGTGGATTTATCGCTCCGCTGCTGGATGAAGGTATTCTG
CGCGATGCTAATGGCAAACCATATTATCGCGGGGAAGATTATAAATTTGATATCAATGCGCCCGCGCCCGAAACCGTTAA
CCCTAGCCTGTGGCGTCAGTCGCAGTTAAACGGTATTTCCGGCCTGTTTAAAGTCACCGACAGAATGTACCAGGTTCGCG
GTCAGGATATCTCCAACATCACCTTTATCGAAGGTGATACCGGGATTATTGTCATCGACCCGCTGGTGACGCCACCGAGC
GCAAAAGCCGCCCTTGACCTTTACTTCCAAAATCGCCCGCAAAAACCGATTGTTGCGGTTATTTATACCCACAGCCATAC
CGACCACTATGGCGGCGTGAAAGGCATTATCTCTGAAGCTGATGTGAAATCCGGTAAAGTGCAGGTTATCGCCCCTGCTG
GCTTTATGGACGAAGCCATCAGCGAAAACGTACTGGCGGGTAATATTATGAGCCACCGTGCACTTTACTCCTACGGCCTG
CTGCTGGCGCATAACCCTCAGGGTAACATCGGCAATGGTCTTGGCGTAACGCTGGCATCGGGCTACCCGAGCATCATCGC
ACCGAACAAAACCATCACCAAAACCGGTGAGAAGATGATTATCGACGGCCTGGAGTTTGACTTCCTGATGACCCCAGGTA
GCGAAGCACCAGCCGAAATGCACTTCTATATTCCGGCCCTGAAAGCGCTGTGTACCGCCGAGAACGCCACGCATACCCTG
CACAACTTCTACACTCTGCGCGGCGCGAAAACCCGCGACACCAGCAAGTGGACCGAGTATCTGAACGAAACGCTGGATAT
GTGGGGTAACGACGCGGAAGTCCTGTTTATGCCGCACACCTGGCCGGTCCGGGGCAATAAGCATATCAATGATTATATTG
GTAAATATCGCGATACTATCAAGTACATTCACGACCAGACCCTGCACCTGGCGAACCAGGGCTACACCATGAATGAAATC
GGCGACATGATTAAACTGCCGCCTGCACTTGCCAATAACTGGGCCAGCCGTGGCTATTACGGTTCTGTCAGCCACAACGC
CCGCGCGGTGTATAACTTCTATCTTGGCTATTACGACGGTAACCCGGCTAACCTGCATCCGTATGGTCAGGTGGAGATGG
GTAAACGTTACGTGCAGGCGCTGGGCGGTTCTGCCCGTGTCATCAGCCTGGCGCAAGAAGCGAACAAGCAAGGTGATTAC
CGCTGGTCGGCAGAACTGCTGAAACAGGTGATTGCCGCCAACCCGGGTGACCAGGTCGCGAAGAATCTGCAAGCGAATAA
CTTTGAACAGCTGGGCTATCAGGCCGAGTCCGCCACCTGGCGCGGTTTCTACCTGACCGGCGCGAAAGAGCTGCGCGAAG
GGGTGCATAAGTTCAGCCACGGCACCACCGGTTCCCCGGACACCATTCGCGGGATGTCGGTCGAAATGCTGTTCGACTTT
ATGTCCGTTCGCCTCGATAGCGCGAAAGCTGCGGGTAAAAATATCAGCCTGAACTTCAATATGAGCAACGGCGATAACCT
CAACCTGACGCTGAACGATAGCGTGCTTAACTACCGTAAAACACTGCAACCGCAAGCCGACGCCTCTTTCTACATCAGCC
GTGAAGATCTGCACGCCGTGCTGACAGGACAAGCCAAAATGGCGGATCTGGTAAAAGCGAAGAAAGCCAAAATTATTGGC
AATGGCGCGAAACTGGAAGAAATTATTGCCTGTCTGGATAATTTCGATTTGTGGGTGAATATCGTAACCCCAAATTAA

Upstream 100 bases:

>100_bases
CACACTTCCACTTATTAAAGTCGCAAATTCCCAATTATGATAACCCCAGCTTTAAATGACGTATTTTGTATGGATTACAT
ATTTACGACATAAATGATAA

Downstream 100 bases:

>100_bases
TGCCACTCACTTTTGGGGGCGCTTAAGCCCCCAAAAGCATTTATTATAAAAATACATACAATCAATTAACACATAAAATA
TATAAGTTATGAATGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 665; Mature: 665

Protein sequence:

>665_residues
MEIYMNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVNQNYAKSLPFSDRQDFDDAQRGFIAPLLDEGIL
RDANGKPYYRGEDYKFDINAPAPETVNPSLWRQSQLNGISGLFKVTDRMYQVRGQDISNITFIEGDTGIIVIDPLVTPPS
AKAALDLYFQNRPQKPIVAVIYTHSHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSHRALYSYGL
LLAHNPQGNIGNGLGVTLASGYPSIIAPNKTITKTGEKMIIDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTL
HNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVRGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEI
GDMIKLPPALANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVISLAQEANKQGDY
RWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSHGTTGSPDTIRGMSVEMLFDF
MSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQPQADASFYISREDLHAVLTGQAKMADLVKAKKAKIIG
NGAKLEEIIACLDNFDLWVNIVTPN

Sequences:

>Translated_665_residues
MEIYMNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVNQNYAKSLPFSDRQDFDDAQRGFIAPLLDEGIL
RDANGKPYYRGEDYKFDINAPAPETVNPSLWRQSQLNGISGLFKVTDRMYQVRGQDISNITFIEGDTGIIVIDPLVTPPS
AKAALDLYFQNRPQKPIVAVIYTHSHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSHRALYSYGL
LLAHNPQGNIGNGLGVTLASGYPSIIAPNKTITKTGEKMIIDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTL
HNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVRGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEI
GDMIKLPPALANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVISLAQEANKQGDY
RWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSHGTTGSPDTIRGMSVEMLFDF
MSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQPQADASFYISREDLHAVLTGQAKMADLVKAKKAKIIG
NGAKLEEIIACLDNFDLWVNIVTPN
>Mature_665_residues
MEIYMNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVNQNYAKSLPFSDRQDFDDAQRGFIAPLLDEGIL
RDANGKPYYRGEDYKFDINAPAPETVNPSLWRQSQLNGISGLFKVTDRMYQVRGQDISNITFIEGDTGIIVIDPLVTPPS
AKAALDLYFQNRPQKPIVAVIYTHSHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSHRALYSYGL
LLAHNPQGNIGNGLGVTLASGYPSIIAPNKTITKTGEKMIIDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTL
HNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVRGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEI
GDMIKLPPALANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVISLAQEANKQGDY
RWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSHGTTGSPDTIRGMSVEMLFDF
MSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQPQADASFYISREDLHAVLTGQAKMADLVKAKKAKIIG
NGAKLEEIIACLDNFDLWVNIVTPN

Specific function: Unknown

COG id: COG2015

COG function: function code Q; Alkyl sulfatase and related hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082368, Length=661, Percent_Identity=96.5204236006051, Blast_Score=1307, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6324409, Length=637, Percent_Identity=44.8979591836735, Blast_Score=590, Evalue=1e-169,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR003033 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 73681; Mature: 73681

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIYMNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVNQNYAKSLPFSDR
CEEEECCCCEEEHEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
QDFDDAQRGFIAPLLDEGILRDANGKPYYRGEDYKFDINAPAPETVNPSLWRQSQLNGIS
CCCCHHHCCCCCHHHCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCHHH
GLFKVTDRMYQVRGQDISNITFIEGDTGIIVIDPLVTPPSAKAALDLYFQNRPQKPIVAV
HHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCCHHEEEEEECCCCCCCEEEE
IYTHSHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSHRALYSYGL
EEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHCCE
LLAHNPQGNIGNGLGVTLASGYPSIIAPNKTITKTGEKMIIDGLEFDFLMTPGSEAPAEM
EEEECCCCCCCCCCEEEEECCCCCEECCCCCEECCCCEEEEECCCEEEEECCCCCCCCEE
HFYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHT
EEHHHHHHHHHHCCCCHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
WPVRGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYY
CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCHHHHCCCCCCCCC
GSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVISLAQEANKQGDY
CCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHCCCCCCC
RWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSH
CHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHCEECCCCEEEEEEEECHHHHHHHHHHHCC
GTTGSPDTIRGMSVEMLFDFMSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRK
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCEEEEEEECCCCCEEEEEECCHHHHHHH
TLQPQADASFYISREDLHAVLTGQAKMADLVKAKKAKIIGNGAKLEEIIACLDNFDLWVN
HCCCCCCCEEEEEHHHHEEEEECCHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCEEEEE
IVTPN
EECCC
>Mature Secondary Structure
MEIYMNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVNQNYAKSLPFSDR
CEEEECCCCEEEHEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
QDFDDAQRGFIAPLLDEGILRDANGKPYYRGEDYKFDINAPAPETVNPSLWRQSQLNGIS
CCCCHHHCCCCCHHHCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCHHH
GLFKVTDRMYQVRGQDISNITFIEGDTGIIVIDPLVTPPSAKAALDLYFQNRPQKPIVAV
HHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCCHHEEEEEECCCCCCCEEEE
IYTHSHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSHRALYSYGL
EEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHCCE
LLAHNPQGNIGNGLGVTLASGYPSIIAPNKTITKTGEKMIIDGLEFDFLMTPGSEAPAEM
EEEECCCCCCCCCCEEEEECCCCCEECCCCCEECCCCEEEEECCCEEEEECCCCCCCCEE
HFYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHT
EEHHHHHHHHHHCCCCHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
WPVRGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYY
CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCHHHHCCCCCCCCC
GSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVISLAQEANKQGDY
CCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHCCCCCCC
RWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSH
CHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHCEECCCCEEEEEEEECHHHHHHHHHHHCC
GTTGSPDTIRGMSVEMLFDFMSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRK
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCEEEEEEECCCCCEEEEEECCHHHHHHH
TLQPQADASFYISREDLHAVLTGQAKMADLVKAKKAKIIGNGAKLEEIIACLDNFDLWVN
HCCCCCCCEEEEEHHHHEEEEECCHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCEEEEE
IVTPN
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]