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The map label for this gene is ytcA [H]

Identifier: 82546424

GI number: 82546424

Start: 4159942

End: 4160265

Strand: Reverse

Name: ytcA [H]

Synonym: SBO_4114

Alternate gene names: 82546424

Gene position: 4160265-4159942 (Counterclockwise)

Preceding gene: 82546425

Following gene: 82546423

Centisome position: 92.04

GC content: 44.14

Gene sequence:

>324_bases
TTGATATTCACTACAGATATTGTTCGCAGCAAACAGGATGTATTTAATATGCCAACAGTTCTCTCTCGCATGGCGATGCA
ACTCAAAAAAACAGCCTGGATAATTCCCGTCTTCATGGTTTCGGGATGCTCATTATCTCCGGCAATCCCGGTGATCGGCG
CTTATTATCCCAGCTGGTTTTTCTGCGCCATTGCCAGCCTTATTTTGACGCTAATCACGAGGCGAATTATTCAGCGGGCA
AATATCAATCTGGCATTTGTCGGAATTATTTATACCGCCCTTTTTGCTGTCTACGCCATGCTGTTCTGGTTGGCATTTTT
CTAA

Upstream 100 bases:

>100_bases
ATCAATTAACACATAAAATATATAAGTTATGAATGCGGTGGCTGAATAAAGCTATTTTTATTCATCAAGAAAATAGCCAT
ACTGACGCCTTCAATGGATA

Downstream 100 bases:

>100_bases
TCTATTTGAGACGCGCTCATGGAAAGTACGCCGAAAAAAGCTCCTCGCAGTAAATTCCCTGCTCTGTTAGTGGTTGCGTT
GGCGCTGGTTGCCCTTGTTT

Product: formate dehydrogenase H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MIFTTDIVRSKQDVFNMPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRIIQRA
NINLAFVGIIYTALFAVYAMLFWLAFF

Sequences:

>Translated_107_residues
MIFTTDIVRSKQDVFNMPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRIIQRA
NINLAFVGIIYTALFAVYAMLFWLAFF
>Mature_107_residues
MIFTTDIVRSKQDVFNMPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRIIQRA
NINLAFVGIIYTALFAVYAMLFWLAFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential). Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ytcA family [H]

Homologues:

Organism=Escherichia coli, GI145693213, Length=91, Percent_Identity=97.8021978021978, Blast_Score=179, Evalue=3e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12153; Mature: 12153

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFTTDIVRSKQDVFNMPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWF
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FCAIASLILTLITRRIIQRANINLAFVGIIYTALFAVYAMLFWLAFF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIFTTDIVRSKQDVFNMPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWF
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FCAIASLILTLITRRIIQRANINLAFVGIIYTALFAVYAMLFWLAFF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11258796 [H]