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The map label for this gene is yjbH [H]

Identifier: 82546372

GI number: 82546372

Start: 4100468

End: 4102564

Strand: Direct

Name: yjbH [H]

Synonym: SBO_4057

Alternate gene names: 82546372

Gene position: 4100468-4102564 (Clockwise)

Preceding gene: 82546371

Following gene: 82546374

Centisome position: 90.72

GC content: 54.27

Gene sequence:

>2097_bases
ATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCATGGCTTGCTACGGCGAAACATATCCTGCGCCCAT
TGGCCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCACGCATGGCGCGGGAAGGGGAGTTGA
GCCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTG
CGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTT
CGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGAGGGATATCGGCGGTACGG
GGCTGTTTGATGCGGAATATCTTGTTGCCAGCAAAGCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGTTAT
CTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACAAACA
GGCGGGATCTATCGACGGTAGCCAGATGTTCCACGGTCCTGCCTCACTGTTTGGCGGCGTGGAATACCAGACGCCTTGGC
AACCGCTGCGCCTGAAACTGGAGTATGAAGGCAATAATTATCAGCAGGATTTTGCCGGGAAGCTGGAGCAAAAAAGTAAG
TTTAACGTCGGTGCGATTTATCGCGTTACCGATTGGGCCGACGTTAACCTTAGCTATGAACGTGGCAACACCTTTATGTT
TGGCGTCACGCTGCGCACCAACTTTAACGATCTGCGCCCGTCTTACAACGATAACGCCCGCCCGCAATATCAACCGCAGC
CGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCGAATCAGTTAACGCTGTTGAAATACAATGTCGGACTTGCCGATCCG
CAGATCCAGGCGAAAGGCGATACGCTGTATGTCACCGGCGAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCG
TGCTAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCATTACGGAAAATCGTCTTAACATGCCGC
AGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGAAACGAAGCTGGCG
CAAAAACGCGTCGAGCCAGTGGTTCCGCAGTCCACCGAGCAGGGCTGGTATATCGACAAATCACGCTTTGATTTCCATAT
CGATCCGGTGCTGAACCAGTCGGTCGGTGGCCCGGAAAACTTTTACATGTATCAGCTGGGCGTGATGGGAATGGCAGATT
TGTGGCTGACGGACCATCTGCTGACCACCGGCAGCCTGTTTGCAAATCTTGCCAACAACTACGACAAGTTTAACTACACC
AATCCGCCGCAGGACTCGCACTTACCGCGCGTTCGTACCCATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAA
CCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTATGGAGGTTATCTCGAAACCATGTTTG
GCGGTGCGGGGGCCGAAGTGTTGTATCGTCCGCTGGACAGTAACTGGGCGTTTGGTCTGGATGCCAACTACGTTAAACAG
CGCGACTGGCGTAGTGCAAAAGATATGATGAAATTCACCGACTACAGCGTGAAAACCGGACATCTGACCGCCTACTGGAC
GCCATCTTTCGCCCAGGACGTGTTGGTGAAAGCCAGCGTCGGGCAGTATCTGGCAGGGGATAAAGGCGGCACGCTGGAGA
TCGCCAAACGCTTTGACAGCGGCGTGGTGGTGGGTGGCTATGCCACGATCACCAACGTTTTGAAAGAGGAGTACGGCGAA
GGGGACTTCACCAAAGGCGTGTATGTCTCGGTACCGTTGGATCTCTTCTCGTCTGGCCCGACACGCAGCCGTGCGGCGAT
TGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTA
GCGTCAATTTCCGCTAA

Upstream 100 bases:

>100_bases
GCATTATTTATGTTGGCCTCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGACATTCTTCAGACTCTG
ACGCAGCGGATACCCCAATA

Downstream 100 bases:

>100_bases
GTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTC
ACCCCCGGTTTGCGATCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MKKRHLLSLLALGISMACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNVGLADP
QIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLA
QKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGMADLWLTDHLLTTGSLFANLANNYDKFNYT
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQ
RDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVLKEEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR

Sequences:

>Translated_698_residues
MKKRHLLSLLALGISMACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNVGLADP
QIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLA
QKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGMADLWLTDHLLTTGSLFANLANNYDKFNYT
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQ
RDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVLKEEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR
>Mature_698_residues
MKKRHLLSLLALGISMACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNVGLADP
QIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLA
QKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGMADLWLTDHLLTTGSLFANLANNYDKFNYT
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQ
RDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVLKEEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcA [H]

Homologues:

Organism=Escherichia coli, GI1790461, Length=698, Percent_Identity=99.2836676217765, Blast_Score=1434, Evalue=0.0,
Organism=Escherichia coli, GI1787219, Length=696, Percent_Identity=64.2241379310345, Blast_Score=942, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 78633; Mature: 78633

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRHLLSLLALGISMACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDN
CCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCEEEEECCC
DQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWL
CCEEEEEEEEEEEECHHHHHHHHHCCHHCCCCCEECCCCCCCCCCEEEEEEEEECCCCCC
PQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCY
CHHCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEE
RDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
CCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQ
CCCEEEEEEECEEEEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
HSVVANQLTLLKYNVGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGI
HHHHHCEEEEEEEECCCCCCCEEECCCEEEEECCCEEECCCCCCEEEECEEEECCCCCCC
KTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLAQKRVEPVVPQSTEQGWYIDK
EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEC
SRFDFHIDPVLNQSVGGPENFYMYQLGVMGMADLWLTDHLLTTGSLFANLANNYDKFNYT
CCCCEEECCHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEV
CCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCEE
LYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV
EEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCHHHHHHHHHHHH
GQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVLKEEYGEGDFTKGVYVSVPLDLFSSGP
CHHHCCCCCCEEHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHCCCC
TRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR
CCCCEEECCCCCCCCCHHHHCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKKRHLLSLLALGISMACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDN
CCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCEEEEECCC
DQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWL
CCEEEEEEEEEEEECHHHHHHHHHCCHHCCCCCEECCCCCCCCCCEEEEEEEEECCCCCC
PQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCY
CHHCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEE
RDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
CCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQ
CCCEEEEEEECEEEEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
HSVVANQLTLLKYNVGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGI
HHHHHCEEEEEEEECCCCCCCEEECCCEEEEECCCEEECCCCCCEEEECEEEECCCCCCC
KTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLAQKRVEPVVPQSTEQGWYIDK
EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEC
SRFDFHIDPVLNQSVGGPENFYMYQLGVMGMADLWLTDHLLTTGSLFANLANNYDKFNYT
CCCCEEECCHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEV
CCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCEE
LYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV
EEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCHHHHHHHHHHHH
GQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVLKEEYGEGDFTKGVYVSVPLDLFSSGP
CHHHCCCCCCEEHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHCCCC
TRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR
CCCCEEECCCCCCCCCHHHHCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]