Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82546009

Identifier: 82546009

GI number: 82546009

Start: 3664684

End: 3665532

Strand: Direct

Name: 82546009

Synonym: SBO_3648

Alternate gene names: NA

Gene position: 3664684-3665532 (Clockwise)

Preceding gene: 82546008

Following gene: 82546010

Centisome position: 81.08

GC content: 45.35

Gene sequence:

>849_bases
ATGAAAAAATTACCACCCGCCCCTTTTTTCAGGCTTAACAGAGCAGCCGAATTATTAGAAATAGATATTGATGATCTTTT
GATTATGGCGGCGGCAGAATCTATATATTTGAGCGCGTACCTTTGCGGCTACGACGGCACATTACATAGCATCGCGAGTC
TTTACCGCAATTGCTCTTTATTCCCAGACGTCAAAGAAGACTGCTTATTACTTGCCGACATAATCACTGAAGTAGAGGAC
GAAAAAAGCTTTAAGGCAGGCGTTGTAAATCATATAGATTGCCATGTGCTTGGGCTATGGCATGTTAACGCCTCCTATAT
ACTCGACATCGCAGGGCTTGATTCTATTGACACTCCCGCACGCATATTCAGCCCCGCACACAGAAAAAGAGAACTAGACG
TAAGTGCGAATTATTATTTTTTTCTCGATTATACAAAACATGCCTTCCACGAAATATCCGTAGAGGATTTGTACATAACA
AGGCCGTGGGTTGAATATATCGGCGAATGCATGGACAAAAACCAGCCCATATACAGCCCCGAAACTCGCATAAACTTACA
AGCTCTTTATGAGGATGTTAAAAACGTTGAGCACGGAAACAGAGAGCGCCACAGGCAAAAGCGCGAAATTTGCCTCTTGG
CGTTGATTTATGTGAAGCGGCACTACCCAGAAGAGTGTAAAGGGAAGAACGGGAAGGAAACCAACGAAGCATGGGCGAAC
GCCACAATAAACCACTGGGCGCTTTTGGGGGGCGGCTATGATGAGCCATCCATAGATTACCTGAAGAAACTCATAGCCGA
CGCAGACAGAACACCGGAAGAACGCACCACGGCAGGGAAAAAAAGGTGA

Upstream 100 bases:

>100_bases
ACTAACTGAATAGATTGAGCCTAGCTCGACGGGGCGAAAAGCGGGAAGCCTTACCGCCTGGCTCAATCACAAAATAAGGC
GCAGCGTAAAAGGTGACACA

Downstream 100 bases:

>100_bases
TAGTAAATTTTACTATCACGATAGTAAAAAATACGATCATTCCTTTTTGAGCGTGCACGCCATTAAATACCCGTAACGAA
GCAACAACTATCGCTAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKKLPPAPFFRLNRAAELLEIDIDDLLIMAAAESIYLSAYLCGYDGTLHSIASLYRNCSLFPDVKEDCLLLADIITEVED
EKSFKAGVVNHIDCHVLGLWHVNASYILDIAGLDSIDTPARIFSPAHRKRELDVSANYYFFLDYTKHAFHEISVEDLYIT
RPWVEYIGECMDKNQPIYSPETRINLQALYEDVKNVEHGNRERHRQKREICLLALIYVKRHYPEECKGKNGKETNEAWAN
ATINHWALLGGGYDEPSIDYLKKLIADADRTPEERTTAGKKR

Sequences:

>Translated_282_residues
MKKLPPAPFFRLNRAAELLEIDIDDLLIMAAAESIYLSAYLCGYDGTLHSIASLYRNCSLFPDVKEDCLLLADIITEVED
EKSFKAGVVNHIDCHVLGLWHVNASYILDIAGLDSIDTPARIFSPAHRKRELDVSANYYFFLDYTKHAFHEISVEDLYIT
RPWVEYIGECMDKNQPIYSPETRINLQALYEDVKNVEHGNRERHRQKREICLLALIYVKRHYPEECKGKNGKETNEAWAN
ATINHWALLGGGYDEPSIDYLKKLIADADRTPEERTTAGKKR
>Mature_282_residues
MKKLPPAPFFRLNRAAELLEIDIDDLLIMAAAESIYLSAYLCGYDGTLHSIASLYRNCSLFPDVKEDCLLLADIITEVED
EKSFKAGVVNHIDCHVLGLWHVNASYILDIAGLDSIDTPARIFSPAHRKRELDVSANYYFFLDYTKHAFHEISVEDLYIT
RPWVEYIGECMDKNQPIYSPETRINLQALYEDVKNVEHGNRERHRQKREICLLALIYVKRHYPEECKGKNGKETNEAWAN
ATINHWALLGGGYDEPSIDYLKKLIADADRTPEERTTAGKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32367; Mature: 32367

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLPPAPFFRLNRAAELLEIDIDDLLIMAAAESIYLSAYLCGYDGTLHSIASLYRNCSL
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCC
FPDVKEDCLLLADIITEVEDEKSFKAGVVNHIDCHVLGLWHVNASYILDIAGLDSIDTPA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECHHHEEEECCCCCCCCCH
RIFSPAHRKRELDVSANYYFFLDYTKHAFHEISVEDLYITRPWVEYIGECMDKNQPIYSP
HHHCCHHHCCEECCCCCEEEEEECCHHHHHHCCHHEEEEECHHHHHHHHHHCCCCCCCCC
ETRINLQALYEDVKNVEHGNRERHRQKREICLLALIYVKRHYPEECKGKNGKETNEAWAN
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHC
ATINHWALLGGGYDEPSIDYLKKLIADADRTPEERTTAGKKR
CCHHHEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MKKLPPAPFFRLNRAAELLEIDIDDLLIMAAAESIYLSAYLCGYDGTLHSIASLYRNCSL
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCC
FPDVKEDCLLLADIITEVEDEKSFKAGVVNHIDCHVLGLWHVNASYILDIAGLDSIDTPA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECHHHEEEECCCCCCCCCH
RIFSPAHRKRELDVSANYYFFLDYTKHAFHEISVEDLYITRPWVEYIGECMDKNQPIYSP
HHHCCHHHCCEECCCCCEEEEEECCHHHHHHCCHHEEEEECHHHHHHHHHHCCCCCCCCC
ETRINLQALYEDVKNVEHGNRERHRQKREICLLALIYVKRHYPEECKGKNGKETNEAWAN
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHC
ATINHWALLGGGYDEPSIDYLKKLIADADRTPEERTTAGKKR
CCHHHEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA