Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yhiL [H]

Identifier: 82545852

GI number: 82545852

Start: 3477052

End: 3478065

Strand: Reverse

Name: yhiL [H]

Synonym: SBO_3486

Alternate gene names: 82545852

Gene position: 3478065-3477052 (Counterclockwise)

Preceding gene: 82545853

Following gene: 82545851

Centisome position: 76.95

GC content: 34.32

Gene sequence:

>1014_bases
GTGTTTTCAAAAATAGATTTTTATAAACAGTGTGGTGTGATTAACCCACAAAATCCCAACACGGCTTATTTTGGCGATAC
AGATGGAAGAGTTGGCGCTGTACTTTATGCATTGCTCGTTTCAGGACATATAGGTATCAGGGAAAAGGGGTGGAGTTTAT
TATGTGAATTATTAAAACACGAAGACATGGCTTCATTCGCATATGAAAATAAAAAATTGGAAAAACTCTTTACTTTATTA
GATACGAGAGACATGATCTTGAATAAGTTGCATCAACATGTTTTTTTAAAAGGCGATGCGATTACCCCTTGTATCTTTCT
TGGGGATCATACAGGCGATAGATTCAGTACTATTTTTGGTGATAAATATATCCTTACTTTGCTAAATTCTATGCGGAATA
TGGAGAGTAATAAAGATAGTCGTATAAATAAAAATGACGTCGTTCTGGCTGGAAATTATGAAATCAATTTCAATGGTAAC
TATACTGCACGACTAGCAAATCATAAACTCTCTGCCGGTGATACGTATAACTTAATTAAAACGCTCGATGTTTGTAATTA
TGACTCAGAAACGAAAGTTTTAAGCAGTCATCACGGAATAATAAGAAATGAAGAAAATGAATGTTATTGTCTAGGTGCTT
TGCAGGTTCCATTTAATCAGATGAAAGACCCAATTGATCCTGAGGAATTAGCAAATATATTTAATAAAAAACATAAACAA
CACATGGATGATCGTTTTATCCATCTAATTAGAAGCAATGCTATAGCATCCACACCTGTATATGACAATTATTTTAATAA
CACTACTGCTTTCAGACCAAAACCTGAAGATATCTTCAAATGTGGACAGACGCTCAAAAAAACTAAACAGAAATATGGCC
ATTATGGATTAGGGGTAGATCAGCATCAAAAAATTGATAATTATACCATGGGGCTAAATTCCTGGAAGATAGCTCCTAAC
GAACGTGGTGATAAAAAAGGTGTCCCAGGGCTTAGTTGTTTTCAACCACATTAA

Upstream 100 bases:

>100_bases
TTTCTTTACTCTTCTTAGCGGTAATTTTAAAGCTGACTAGCGTTGGGATGTCTCTAAAGAGACGTTTCCTAAGGATAAGT
TTGCTAGCTATGTTAATTCT

Downstream 100 bases:

>100_bases
AACTCCATGAGTGCTGTGGTATATCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGACATGTT
CTGATGACGCCTCTACAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MFSKIDFYKQCGVINPQNPNTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEDMASFAYENKKLEKLFTLL
DTRDMILNKLHQHVFLKGDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMESNKDSRINKNDVVLAGNYEINFNGN
YTARLANHKLSAGDTYNLIKTLDVCNYDSETKVLSSHHGIIRNEENECYCLGALQVPFNQMKDPIDPEELANIFNKKHKQ
HMDDRFIHLIRSNAIASTPVYDNYFNNTTAFRPKPEDIFKCGQTLKKTKQKYGHYGLGVDQHQKIDNYTMGLNSWKIAPN
ERGDKKGVPGLSCFQPH

Sequences:

>Translated_337_residues
MFSKIDFYKQCGVINPQNPNTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEDMASFAYENKKLEKLFTLL
DTRDMILNKLHQHVFLKGDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMESNKDSRINKNDVVLAGNYEINFNGN
YTARLANHKLSAGDTYNLIKTLDVCNYDSETKVLSSHHGIIRNEENECYCLGALQVPFNQMKDPIDPEELANIFNKKHKQ
HMDDRFIHLIRSNAIASTPVYDNYFNNTTAFRPKPEDIFKCGQTLKKTKQKYGHYGLGVDQHQKIDNYTMGLNSWKIAPN
ERGDKKGVPGLSCFQPH
>Mature_337_residues
MFSKIDFYKQCGVINPQNPNTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEDMASFAYENKKLEKLFTLL
DTRDMILNKLHQHVFLKGDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMESNKDSRINKNDVVLAGNYEINFNGN
YTARLANHKLSAGDTYNLIKTLDVCNYDSETKVLSSHHGIIRNEENECYCLGALQVPFNQMKDPIDPEELANIFNKKHKQ
HMDDRFIHLIRSNAIASTPVYDNYFNNTTAFRPKPEDIFKCGQTLKKTKQKYGHYGLGVDQHQKIDNYTMGLNSWKIAPN
ERGDKKGVPGLSCFQPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789902, Length=321, Percent_Identity=36.7601246105919, Blast_Score=204, Evalue=6e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38428; Mature: 38428

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKIDFYKQCGVINPQNPNTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKH
CCCCCCHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
EDMASFAYENKKLEKLFTLLDTRDMILNKLHQHVFLKGDAITPCIFLGDHTGDRFSTIFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCCHHHHHHC
DKYILTLLNSMRNMESNKDSRINKNDVVLAGNYEINFNGNYTARLANHKLSAGDTYNLIK
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEECCCEEEEEECCCCCCCCHHHHHH
TLDVCNYDSETKVLSSHHGIIRNEENECYCLGALQVPFNQMKDPIDPEELANIFNKKHKQ
HHHHCCCCCHHHHHHHCCCCEECCCCCEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHH
HMDDRFIHLIRSNAIASTPVYDNYFNNTTAFRPKPEDIFKCGQTLKKTKQKYGHYGLGVD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
QHQKIDNYTMGLNSWKIAPNERGDKKGVPGLSCFQPH
HHHCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFSKIDFYKQCGVINPQNPNTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKH
CCCCCCHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
EDMASFAYENKKLEKLFTLLDTRDMILNKLHQHVFLKGDAITPCIFLGDHTGDRFSTIFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCCHHHHHHC
DKYILTLLNSMRNMESNKDSRINKNDVVLAGNYEINFNGNYTARLANHKLSAGDTYNLIK
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEECCCEEEEEECCCCCCCCHHHHHH
TLDVCNYDSETKVLSSHHGIIRNEENECYCLGALQVPFNQMKDPIDPEELANIFNKKHKQ
HHHHCCCCCHHHHHHHCCCCEECCCCCEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHH
HMDDRFIHLIRSNAIASTPVYDNYFNNTTAFRPKPEDIFKCGQTLKKTKQKYGHYGLGVD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
QHQKIDNYTMGLNSWKIAPNERGDKKGVPGLSCFQPH
HHHCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]