Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yhiJ [H]

Identifier: 82545851

GI number: 82545851

Start: 3475777

End: 3476790

Strand: Reverse

Name: yhiJ [H]

Synonym: SBO_3485

Alternate gene names: 82545851

Gene position: 3476790-3475777 (Counterclockwise)

Preceding gene: 82545852

Following gene: 82545849

Centisome position: 76.92

GC content: 36.09

Gene sequence:

>1014_bases
ATGAAAATTGGAACTGTGGCAGGCACTAACGACAGTACAACGACAATCGCAACAAATGATATGGTGCAAGAGCATGTTAC
CAACTTCACTAAAGAACTGTTTGGGTATATTGCAAATGGTATAGGTGATGATATATCAAGTATTGCCAGGACAATGCTCG
GTGAGGTTGTGGAAAAAATAGATGATTGGCAAATAGAACGGTTCCAACAATCTATTCAAGATGACAAAATTTCATTTACC
ATACAAACGGATCATTCAGAAAAATATAGTATGCTATCGGGCATGCGTGCTCATATTCTACGTAGGGATAATAATTATCA
GTTTATTGTGACAATTAATAGTAAAAATTACGGTTGCTCTCTTGATAATACTGATGTTAATTGGTGCAGTGTTGTTTATT
TACTTAATAATATGACAGTAAATGATAATGCTAATGATGTTGCAGTTACTGAGTCGTACAAACCCATCTGGAACTGGAAA
ATATCGCAATACAATGTATTTGATATTAAATTCGAAACAATTATAAACCCCCAGTTCGCTGACAGAATCTATTTCTCCAA
TTGTTCACCTGTTGATCCCACAAGTACCAGGCCGACCTATTTTGGGGATACCGATGGTTCAGTTGGTGCAGTTTTGTACG
CGCTTTTTGCTACGGGATATTTGGGAATCATGACTGAAGGAGAAAATTTCCTTTGCCAGTTGCTTACTATAGAAGATGAA
GTTCTCAACGTATTGCTAAGGGAAAACTTTAATGAGCAACTTGACACTAATATTAATACAATAATCAGTAACCTGAACAG
AAGAGATAATGTTTTAGAAAGTCTTCAGCCTTATTTAGTTATTAATAAAGACGCAGTCACGCCATGTACGTTTCTGGGCG
ACCAAACCGGCGATCGATTTAGTAATATCTGTGGCGATCAATTTATCATCGATTTGTTAAAACGCATAATGAGTATCAAT
GAAAATGTTCATGTATTAGCTGGAAATCATGAAACGAATTGCAATGGTAACTAG

Upstream 100 bases:

>100_bases
TTGTGCAAAATATAATTATTTTTCCATCGAACATGAGGTGTATGTCATAAGATAAAATGTTAACTATGTATTCCTCGCGG
TGAATAATATGAGGTAAAAG

Downstream 100 bases:

>100_bases
GTAATGCTGCCAACTTACTGATTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCC
TTCCTGCTCCGCTACTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKIDDWQIERFQQSIQDDKISFT
IQTDHSEKYSMLSGMRAHILRRDNNYQFIVTINSKNYGCSLDNTDVNWCSVVYLLNNMTVNDNANDVAVTESYKPIWNWK
ISQYNVFDIKFETIINPQFADRIYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFATGYLGIMTEGENFLCQLLTIEDE
VLNVLLRENFNEQLDTNINTIISNLNRRDNVLESLQPYLVINKDAVTPCTFLGDQTGDRFSNICGDQFIIDLLKRIMSIN
ENVHVLAGNHETNCNGN

Sequences:

>Translated_337_residues
MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKIDDWQIERFQQSIQDDKISFT
IQTDHSEKYSMLSGMRAHILRRDNNYQFIVTINSKNYGCSLDNTDVNWCSVVYLLNNMTVNDNANDVAVTESYKPIWNWK
ISQYNVFDIKFETIINPQFADRIYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFATGYLGIMTEGENFLCQLLTIEDE
VLNVLLRENFNEQLDTNINTIISNLNRRDNVLESLQPYLVINKDAVTPCTFLGDQTGDRFSNICGDQFIIDLLKRIMSIN
ENVHVLAGNHETNCNGN
>Mature_337_residues
MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKIDDWQIERFQQSIQDDKISFT
IQTDHSEKYSMLSGMRAHILRRDNNYQFIVTINSKNYGCSLDNTDVNWCSVVYLLNNMTVNDNANDVAVTESYKPIWNWK
ISQYNVFDIKFETIINPQFADRIYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFATGYLGIMTEGENFLCQLLTIEDE
VLNVLLRENFNEQLDTNINTIISNLNRRDNVLESLQPYLVINKDAVTPCTFLGDQTGDRFSNICGDQFIIDLLKRIMSIN
ENVHVLAGNHETNCNGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789902, Length=337, Percent_Identity=94.9554896142433, Blast_Score=664, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38087; Mature: 38087

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKI
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DDWQIERFQQSIQDDKISFTIQTDHSEKYSMLSGMRAHILRRDNNYQFIVTINSKNYGCS
CCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCC
LDNTDVNWCSVVYLLNNMTVNDNANDVAVTESYKPIWNWKISQYNVFDIKFETIINPQFA
CCCCCCHHHHHEEHHHCEEECCCCCCEEEECCCCCCCCEEECCEEEEEEEEEEECCCHHH
DRIYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFATGYLGIMTEGENFLCQLLTIEDE
CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHH
VLNVLLRENFNEQLDTNINTIISNLNRRDNVLESLQPYLVINKDAVTPCTFLGDQTGDRF
HHHHHHHHCCCHHHHCCHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCHHHCCCCCCHHH
SNICGDQFIIDLLKRIMSINENVHVLAGNHETNCNGN
HHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKI
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DDWQIERFQQSIQDDKISFTIQTDHSEKYSMLSGMRAHILRRDNNYQFIVTINSKNYGCS
CCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCC
LDNTDVNWCSVVYLLNNMTVNDNANDVAVTESYKPIWNWKISQYNVFDIKFETIINPQFA
CCCCCCHHHHHEEHHHCEEECCCCCCEEEECCCCCCCCEEECCEEEEEEEEEEECCCHHH
DRIYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFATGYLGIMTEGENFLCQLLTIEDE
CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHH
VLNVLLRENFNEQLDTNINTIISNLNRRDNVLESLQPYLVINKDAVTPCTFLGDQTGDRF
HHHHHHHHCCCHHHHCCHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCHHHCCCCCCHHH
SNICGDQFIIDLLKRIMSINENVHVLAGNHETNCNGN
HHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]