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The map label for this gene is yhdU [H]

Identifier: 82545634

GI number: 82545634

Start: 3260854

End: 3261033

Strand: Direct

Name: yhdU [H]

Synonym: SBO_3257

Alternate gene names: 82545634

Gene position: 3260854-3261033 (Clockwise)

Preceding gene: 161984845

Following gene: 82545636

Centisome position: 72.15

GC content: 39.44

Gene sequence:

>180_bases
ATGATTCGCAAGTATTGGTGGCTCGTCGTTTTCGCTGTCTTCGTTTTTCTGTTTGATACTTTACTGATGCAGTGGATTGA
ACTGCTGACAACAGAAACAGACAAATGCCGTAATATGAACTCAGTTAATCCACTAAAACTGGTTAACTGTGACGAACTGA
ATTTTCAGGACAGAATGTGA

Upstream 100 bases:

>100_bases
ATCTCATTGCAAAGTAAAGGAAGTGTAAGCCTGGTTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTA
AACATGCACAGGCTCAGGTA

Downstream 100 bases:

>100_bases
ATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTT
ATCGACCAGCGCGGGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNPLKLVNCDELNFQDRM

Sequences:

>Translated_59_residues
MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNPLKLVNCDELNFQDRM
>Mature_59_residues
MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNPLKLVNCDELNFQDRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789663, Length=59, Percent_Identity=98.3050847457627, Blast_Score=119, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022540
- ProDom:   PD052549 [H]

Pfam domain/function: PF10831 DUF2556 [H]

EC number: NA

Molecular weight: Translated: 7234; Mature: 7234

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNPLKLVNCDELNFQDRM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNPLKLVNCDELNFQDRM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]