| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yhbX [H]
Identifier: 82545588
GI number: 82545588
Start: 3213360
End: 3215003
Strand: Direct
Name: yhbX [H]
Synonym: SBO_3209
Alternate gene names: 82545588
Gene position: 3213360-3215003 (Clockwise)
Preceding gene: 82545587
Following gene: 161984849
Centisome position: 71.09
GC content: 43.13
Gene sequence:
>1644_bases GTGAACTTGGATTTCTGGATGACAGTATTCAACAAATTTGCTAGAAGTTTTAAATCTCATTGGTTGTTGTATCTTTGTGT TATTGTTTTTGGTATTACGAACTTAGTCGCCTCTTCCGGCGCGCATATGGTTCAGCGATTGCTGTTCTTCGTCCTGACCA TCCTGGTTGTAAAACGTATATCATCCCTTCCGCTTCGCCTGCTTGTTGCCGCACCATTTGTGTTACTGACTGCGGCAGAC ATGAGTATTAGCCTCTATTCATGGTGTACCTTTGGTACAACTTTCAATGATGGATTTGCGATTAGTGTGCTCCAGAGTGA TCCGGATGAAGTTGTCAAAATGCTGGGGATGTATATCCCTTATCTATGTGCCTTTGCTTTTTTATCCCTTCTTTTTTGGG CAGTAATAATAAAATATGATGTTTCCTTGCCGACAAAAAAAGTGACAGGAATATTATTGCTGATTGTCATTTCGGGCAGT TTATTTTCCGCTTGTCAATTTGCTTATAAAGATGCAAAAAATAAAAAAACGTTCAGTCCATATATACTAGCGTCGCGATT TGCTACCTATACGCCGTTTTTCAATCTCAACTATTTTGCTTTAGCAGCGAAAGAGCATCAAAGATTACTCTCAATTGCAA ACACGGTGCCGTATTTTCAATTATCAGTCAGGGATACAGGTATTGATACCTACGTGTTGATTGTGGGGGAGTCTGTACGT GTCGACAATATGTCTTTGTATGGATATACACGCTCTACGACACCGCAAGTTGAAGCACAAAGAAAACAGATCAAACTGTT TAATCAAGCAATAAGCAGCGCACCTTACACTGCGCTGTCGGTTCCCCTTTCTTTAACTGCTGATTCTGTTTTGAGTCATG ACATTCATAATTACCCCGACAACATTATTAATATGGCTAATCAAGCAGGATTTCAGACTTTCTGGCTAAGCTCGCAATCC GCTTTTCGGCAGAATGGTACTGCAGTTACCAGTATCGCCATGCGCGCCATGGAAACAGTTTATGTCAGAGGATTTGATGA ATTGTTGTTGCCGCATTTATCGCAAGCATTACAGCAAAATACGCAGCAAAAGAAACTGATTGTTCTTCATTTAAATGGAA GCCATGAACCGGCTTGTAGCGCCTATCCGCAATCCAGCGCCGTGTTTCAACCGCAGGACGATCAGGATGCCTGCTATGAC AACTCCATTCATTACACAGATAGTTTGCTAGGTCAGGTTTTTGAATTATTAAAAGATCGCCGCGCCTCGGTCATGTATTT TGCCGACCACGGCCTGGAACGTGACCCTACGAAGAAGAACGTCTATTTTCATGGAGGCAGGGAGGCTAGCCAGCAGGCAT ATCATGTCCCGATGTTTATCTGGTATAGCCCCGTTCTTGGGGATGGCGTGGATCGCACAACGGAAAACAACATCTTTTCG ACAGCTTACAATAATTACCTTATTAATGCGTGGATGGGGGTAACAAAGCCGGAACAGCCGCAAACGCTTGAGGAAGTGAT TGCACACTATAAAGGAGACTCACGGGTTGTGGATGCAAACCATGATGTTTTCGATTATGTGATGTTCAGAAAGGAGTTTA CAGAGGATAAGCAAGGTAACCCCCCCCCTGAAGGGCAGGGTTGA
Upstream 100 bases:
>100_bases AAAAAGAAAAAACTAACAGTGTTTCGGTCTGATATGGATCAGAGTTGAAAAACATGTCTGATATAAAATTGAACATTGTT GATAATTGTTTATATTGGTT
Downstream 100 bases:
>100_bases TGTCGAATTACTGGCCTTTGTTTTCCATATTCTCCACCTGCGGCACGCCTGAAGTGGCAGAGGAGGAGAGCAGGCCAGTT TTGGCATAACCAAAAAGTTT
Product: alkaline phosphatase I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MNLDFWMTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAAD MSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGS LFSACQFAYKDAKNKKTFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVR VDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQS AFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYD NSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFS TAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGNPPPEGQG
Sequences:
>Translated_547_residues MNLDFWMTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAAD MSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGS LFSACQFAYKDAKNKKTFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVR VDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQS AFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYD NSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFS TAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGNPPPEGQG >Mature_547_residues MNLDFWMTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAAD MSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGS LFSACQFAYKDAKNKKTFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVR VDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQS AFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYD NSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFS TAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGNPPPEGQG
Specific function: Involved In Adherence (By Similarity). [C]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family [H]
Homologues:
Organism=Escherichia coli, GI87082223, Length=541, Percent_Identity=98.8909426987061, Blast_Score=1112, Evalue=0.0, Organism=Escherichia coli, GI1787035, Length=268, Percent_Identity=30.9701492537313, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1790392, Length=479, Percent_Identity=24.8434237995825, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI87082286, Length=404, Percent_Identity=28.2178217821782, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI87082372, Length=293, Percent_Identity=27.3037542662116, Blast_Score=86, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 61709; Mature: 61709
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDFWMTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIP HHCCHHHHHHHHHHHHHHCCCCEEEEHHEECCCEECCCEEEEEECCCHHHHHHHHHHHHH YLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKTFSP HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCH YILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVR HHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCEEE VDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVPLSLTADSVLSHDIHNYPD ECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCH NIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQN HHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC TQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDR CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC RASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFS CCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEECEEEEEECCHHCCCCCCCCCCCEEH TAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGN HHHCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCC PPPEGQG CCCCCCC >Mature Secondary Structure MNLDFWMTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIP HHCCHHHHHHHHHHHHHHCCCCEEEEHHEECCCEECCCEEEEEECCCHHHHHHHHHHHHH YLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKTFSP HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCH YILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVR HHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCEEE VDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVPLSLTADSVLSHDIHNYPD ECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCH NIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQN HHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC TQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDR CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC RASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFS CCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEECEEEEEECCHHCCCCCCCCCCCEEH TAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMFRKEFTEDKQGN HHHCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCC PPPEGQG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]