| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yghZ [H]
Identifier: 82545386
GI number: 82545386
Start: 2998859
End: 2999899
Strand: Direct
Name: yghZ [H]
Synonym: SBO_2995
Alternate gene names: 82545386
Gene position: 2998859-2999899 (Clockwise)
Preceding gene: 82545381
Following gene: 82545388
Centisome position: 66.35
GC content: 51.97
Gene sequence:
>1041_bases ATGGTCTGGTTAGCGAATCCCGCACGTTACGGGCAGATGCAGTACCGCTATTGCGGAAAAAGTGGTTTACGCCTGCCCGC GTTATCGCTCGGTTTATGGCACAATTTCGGTCACGTTAACGCGCTGGAATCACAGCGTGCAATCCTGCGTAAAGCGTTTG ATTTAGGCATTACGCACTTTGATTTAGCCAACAATTACGGGCCGCCTCCAGGAAGCGCAGAAGAGAACTTTGGTCGCCTG CTGCGGGAGGATTTTGCCGCTTATCGCGATGAACTGATTATCTCTACCAAGGCTGGCTACGATATGTGGCCCGGCCCTTA CGGCTCTGGCGGTTCACGTAAATACCTGCTCGCCAGCCTCGACCAAAGCCTGAAGCGTATGGGGCTTGAGTATGTCGATA TCTTTTACTCTCATCGCGTCGATGAAAATACGCCGATGGAAGAAACCGCCTCTGCGCTGGCTCATGCGGTACAAAGCGGT AAGGCGCTGTATGTCGGGATCTCCTCTTACTCGCCAGAGCGGACGCAAAAAATGGTCGAGTTGCTGCACGAGTGGAAAAT TCCGCTTTTAATTCATCAACCTTCGTACAATTTACTGAACCGCTGGGTGGATAAAAGCGGCCTGCTGGATACCCTGCAAA ATAACGGCGTGGGCTGTATTGCCTTTACTCCTCTGGCTCAGGGATTGCTGACCGGAAAATATCTCAACGGCATTCCGCAA GATTCACGGATGCATCGTGAAGGGAATAAAGTTCGTGGTCTGACGCCGAAAATGCTTACCGAAGCCAACCTCAACAGCCT GCGCTTATTGAATGAAATGGCACAGCAGCGTGGACAATCAATGGCGCAAATGGCGTTAAGCTGGTTGCTGAAAGATGATC GCGTGACGTCGGTATTGATTGGTGTCAGCCGCGCGGAGCAACTAGAGGAGAACGTGCAGGCGCTGAATAATCTGACATTT AGCACCGAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATG A
Upstream 100 bases:
>100_bases CAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCGCTAAACTAGAAACATTGTTTCGAAATTG AACGGTGGAAAGGAGAGGTC
Downstream 100 bases:
>100_bases CCTGTTAATAACGGGCGCGCGAACCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCA CAAATGCAGAGAGCACAAAC
Product: aldo-keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MVWLANPARYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRL LREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG KALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQ DSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGVSRAEQLEENVQALNNLTF STEELAQIDQHIADGELNLWQASSDK
Sequences:
>Translated_346_residues MVWLANPARYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRL LREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG KALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQ DSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGVSRAEQLEENVQALNNLTF STEELAQIDQHIADGELNLWQASSDK >Mature_346_residues MVWLANPARYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRL LREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG KALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQ DSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGVSRAEQLEENVQALNNLTF STEELAQIDQHIADGELNLWQASSDK
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504825, Length=339, Percent_Identity=34.8082595870207, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI27436969, Length=329, Percent_Identity=34.6504559270517, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI27436964, Length=329, Percent_Identity=34.0425531914894, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI27436962, Length=324, Percent_Identity=34.2592592592593, Blast_Score=172, Evalue=3e-43, Organism=Homo sapiens, GI27436966, Length=324, Percent_Identity=33.9506172839506, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI27436971, Length=326, Percent_Identity=33.7423312883436, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI41152114, Length=211, Percent_Identity=31.7535545023697, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI41327764, Length=213, Percent_Identity=30.5164319248826, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI223718702, Length=286, Percent_Identity=28.6713286713287, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1789375, Length=346, Percent_Identity=98.8439306358381, Blast_Score=707, Evalue=0.0, Organism=Escherichia coli, GI87081735, Length=330, Percent_Identity=36.0606060606061, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1789199, Length=350, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788070, Length=318, Percent_Identity=26.4150943396226, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1788081, Length=323, Percent_Identity=23.8390092879257, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=337, Percent_Identity=23.1454005934718, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6323998, Length=315, Percent_Identity=24.7619047619048, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319958, Length=238, Percent_Identity=24.7899159663866, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322615, Length=238, Percent_Identity=24.3697478991597, Blast_Score=66, Evalue=8e-12, Organism=Drosophila melanogaster, GI24640980, Length=345, Percent_Identity=27.8260869565217, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI45549126, Length=345, Percent_Identity=27.8260869565217, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24646159, Length=328, Percent_Identity=25.609756097561, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24646155, Length=328, Percent_Identity=26.219512195122, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38785; Mature: 38785
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWLANPARYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHF CEECCCCHHHCCHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEE DLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASL EHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHH DQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVE HHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH LLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQ HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCC DSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLI CHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GVSRAEQLEENVQALNNLTFSTEELAQIDQHIADGELNLWQASSDK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCC >Mature Secondary Structure MVWLANPARYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHF CEECCCCHHHCCHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEE DLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASL EHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHH DQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVE HHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH LLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQ HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCC DSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLI CHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GVSRAEQLEENVQALNNLTFSTEELAQIDQHIADGELNLWQASSDK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]