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The map label for this gene is insD1 [C]

Identifier: 82545352

GI number: 82545352

Start: 2966727

End: 2966930

Strand: Reverse

Name: insD1 [C]

Synonym: SBO_2958

Alternate gene names: 82545352

Gene position: 2966930-2966727 (Counterclockwise)

Preceding gene: 82545353

Following gene: 82545351

Centisome position: 65.64

GC content: 57.35

Gene sequence:

>204_bases
GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCA
GTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC
TCCGTATACACCATGTTATCGGAGAGCTGCCCACGTATGGTTAG

Upstream 100 bases:

>100_bases
CCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTT
GAATATGGACGGGCAAAAAA

Downstream 100 bases:

>100_bases
CGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGAT
CATGCGCCAGAATGCGCTGT

Product: IS2 ORF2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYG

Sequences:

>Translated_67_residues
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYG
>Mature_67_residues
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYG

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=67, Percent_Identity=100, Blast_Score=137, Evalue=2e-34,
Organism=Escherichia coli, GI1789424, Length=67, Percent_Identity=100, Blast_Score=137, Evalue=2e-34,
Organism=Escherichia coli, GI1789224, Length=67, Percent_Identity=100, Blast_Score=137, Evalue=2e-34,
Organism=Escherichia coli, GI1788305, Length=67, Percent_Identity=100, Blast_Score=137, Evalue=2e-34,
Organism=Escherichia coli, GI1787669, Length=67, Percent_Identity=100, Blast_Score=137, Evalue=2e-34,
Organism=Escherichia coli, GI1786558, Length=67, Percent_Identity=100, Blast_Score=137, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 7708; Mature: 7708

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHH
GELPTYG
HCCCCCC
>Mature Secondary Structure
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHH
GELPTYG
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA