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The map label for this gene is cfaC [H]

Identifier: 82545350

GI number: 82545350

Start: 2965133

End: 2966050

Strand: Reverse

Name: cfaC [H]

Synonym: SBO_2956

Alternate gene names: 82545350

Gene position: 2966050-2965133 (Counterclockwise)

Preceding gene: 82545351

Following gene: 82545349

Centisome position: 65.62

GC content: 47.93

Gene sequence:

>918_bases
GTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATGGCGATCAAACGTCATGGCAGTTATCGCATACCTTTTATAA
TGATTCATTCAGCCATAAAGAACTTGGCGTAACCGTCGGAGGCCTGAACACCGATACCATAAACAGCGCGGTTAACGGGC
GTTGGGATGGGCAATACGGAAATGTCTACGCTACCGTATCTGATAGTTATGACCGTAAGAATCATGATCATCTTTCGGCC
TTTACGGGCACTTATAGCTCTACGCTGGCTGTCAGTCGCTATGGCGTTAATTTGGGAGCCAGTGGTACAGACGATTTGCT
GGGTGCGGTATTGGTGGATGTGAAAGGCTTCTCTGAACAGGATGAAGAGAGTCAGGATCTGCAACTCGAAGCGCGGGTGG
CAGGCAGCCGAACTTTGCAGCTTGGTCAAAGCGACAGTGTGTTGTTCCCTTATCCTGGATTTCAGTCTGGTTTTGTTGAG
GTTAACGACAGTAGCCAGGGCAATCAGCAGGGGACAACAAACATCATTAACGGTGCAGGGAATCGTGAATTAATGTTGTT
GCCTGGCAAGCTGCGCTATCGCGAAGTGTCTGCCAGCTTTAACTACAACTATATCGGTCGTTTATTACTGCCGGCAGCGG
TGAAAAAATTCCCGATTGTGGGGCTGAACAGCGCCATGTTACTGGTAGCTGAAGATGGCGGATTTACACTTGAAATTAAC
GGCAGCGAAAAAGAGCTCTATCTGCTTTCCGGGCAGCAATTCCTTAAGTGTCCACTGAGTGTTGAAAAGAAACGCGCCAG
CATTCGTTACAGCGGAGATGTTACTTGTAGTGTGGTGACTTATTCACAATTACCGGAGTTGAAACAGCCTAAATTACGTG
GAAACGTTCAGACGGCGCAAAGGGAGGTTGCACCATGA

Upstream 100 bases:

>100_bases
GCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCA
GCGGGCTTGTAATGGGTTAA

Downstream 100 bases:

>100_bases
GAAATCGATTGATTGCGGCGATATTGGGCTTGTTTGGCACGCTCACTGGCGTTCAGGCAGCTCCTGACGTGACCAGTGAA
ATTACGTATGATTTGGCATC

Product: outer membrane fimbrial user protein

Products: NA

Alternate protein names: Colonization factor antigen I subunit C [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MITDVWKYRGKSNGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQYGNVYATVSDSYDRKNHDHLSA
FTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQDEESQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGFVE
VNDSSQGNQQGTTNIINGAGNRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAEDGGFTLEIN
GSEKELYLLSGQQFLKCPLSVEKKRASIRYSGDVTCSVVTYSQLPELKQPKLRGNVQTAQREVAP

Sequences:

>Translated_305_residues
MITDVWKYRGKSNGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQYGNVYATVSDSYDRKNHDHLSA
FTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQDEESQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGFVE
VNDSSQGNQQGTTNIINGAGNRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAEDGGFTLEIN
GSEKELYLLSGQQFLKCPLSVEKKRASIRYSGDVTCSVVTYSQLPELKQPKLRGNVQTAQREVAP
>Mature_305_residues
MITDVWKYRGKSNGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQYGNVYATVSDSYDRKNHDHLSA
FTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQDEESQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGFVE
VNDSSQGNQQGTTNIINGAGNRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAEDGGFTLEIN
GSEKELYLLSGQQFLKCPLSVEKKRASIRYSGDVTCSVVTYSQLPELKQPKLRGNVQTAQREVAP

Specific function: May serve as anchor for the fimbriae in the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential). Cell outer membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33352; Mature: 33352

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDVWKYRGKSNGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQYG
CCCCCHHHCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHCCCCEECCCCC
NVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQ
CEEEEEECCCCCCCCCHHHHCCCCCCCEEEEEEECEECCCCCCHHHHHEEEEEECCCCCC
DEESQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTNIINGAG
CCCCCCEEEEEEECCCEEEEECCCCCEEECCCCCCCCEEEECCCCCCCCCCCCEEECCCC
NRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAEDGGFTLEIN
CCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEECCCEEEEEECCCCEEEEEE
GSEKELYLLSGQQFLKCPLSVEKKRASIRYSGDVTCSVVTYSQLPELKQPKLRGNVQTAQ
CCCCEEEEECCCCEEECCCCCCCCCEEEEECCCEEEEEEEHHHCCCCCCCCCCCCHHHHH
REVAP
HCCCC
>Mature Secondary Structure
MITDVWKYRGKSNGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQYG
CCCCCHHHCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHCCCCEECCCCC
NVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQ
CEEEEEECCCCCCCCCHHHHCCCCCCCEEEEEEECEECCCCCCHHHHHEEEEEECCCCCC
DEESQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTNIINGAG
CCCCCCEEEEEEECCCEEEEECCCCCEEECCCCCCCCEEEECCCCCCCCCCCCEEECCCC
NRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAEDGGFTLEIN
CCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEECCCEEEEEECCCCEEEEEE
GSEKELYLLSGQQFLKCPLSVEKKRASIRYSGDVTCSVVTYSQLPELKQPKLRGNVQTAQ
CCCCEEEEECCCCEEECCCCCCCCCEEEEECCCEEEEEEEHHHCCCCCCCCCCCCHHHHH
REVAP
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2569152; 1352712 [H]