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The map label for this gene is ypfJ [H]

Identifier: 82544923

GI number: 82544923

Start: 2485918

End: 2486781

Strand: Reverse

Name: ypfJ [H]

Synonym: SBO_2492

Alternate gene names: 82544923

Gene position: 2486781-2485918 (Counterclockwise)

Preceding gene: 82544924

Following gene: 82544922

Centisome position: 55.02

GC content: 53.47

Gene sequence:

>864_bases
ATGCGTTGGCAAGGGCGACGTGAAAGTGACAATGTTGAAGACAGGCGCAACAGCTCCGGTGGTCCGTCTATGGGCGGTCC
CGGTTTTCGCCTGCCAAGCGGTAAAGGCGGGCTGATTTTACTGATAGTCGTGCTGGTTGCAGGCTACTATGGTGTTGATT
TAACCGGGTTAATGACTGGACAGCCGGTTTCCCAACAACAATCAACGCGGTCCATTAGCCCTAATGAAGACGAAGCTGCA
AAATTCACCTCGGTGATTCTGGCAACCACGGAAGACACCTGGGGACAACAGTTCGAGAAGATGGGTAAGACCTATCAGCA
ACCGAAGCTGGTCATGTACCGTGGAATGACGCGCACCGGCTGCGGGGCGGGCCAGTCCATTATGGGGCCGTTCTATTGCC
CGGCGGATGGCACAGTTTATATCGATCTCTCCTTCTATGATGACATGAAAGACAAACTTGGCGCGGATGGCGATTTTGCC
CAGGGGTACGTTATCGCCCATGAAGTCGGTCATCATGTGCAGAAACTGTTAGGCATCGAGCCGAAAGTTCGTCAACTGCA
ACAAAACGCGACGCAGGCGGAAGTGAACCGCTTATCTGTGCGTATGGAACTCCAGGCCGACTGTTTTGCCGGTGTCTGGG
GGCATAACATGCAGCAGCAAGGCGTTCTGGAAACCGGCGATCTGGAAGAGGCGCTGAATGCGGCGCAGGCCATCGGCGAT
GACCGTTTACAACAGCAAAGTCAGGGGCGAGTAGTACCAGACAGTTTCACACATGGCACTTCTCAGCAACGCTACAGCTG
GTTTAAACGTGGTTTCGACAGCGGCGATCCGGCACAATGCAATACTTTTGGTAAAAGCATTTAA

Upstream 100 bases:

>100_bases
GAACGCTCATTCCTCCGCCATTTCATCCCGCTTTCCTGTGGTAATCTTCCTCTGAACCACCTACGATCATTTCTATAATG
AATATATTGTTGAGGTATCT

Downstream 100 bases:

>100_bases
TTTCCGGGGCAGGGATGGCTGAACTGACTGCGCTTTACACATTAACAGCGCAAATGAAACGTGAAGGGATCCGCCGCTTG
CTGGTGTTGAGCGGGGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAA
KFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQQQGVLETGDLEEALNAAQAIGD
DRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI

Sequences:

>Translated_287_residues
MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAA
KFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQQQGVLETGDLEEALNAAQAIGD
DRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI
>Mature_287_residues
MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAA
KFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQQQGVLETGDLEEALNAAQAIGD
DRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=287, Percent_Identity=99.6515679442509, Blast_Score=593, Evalue=1e-171,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31488; Mature: 31488

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTG
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECC
QPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTG
CCCCHHHHHCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCC
CGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFAQGYVIAHEVGHHVQKLLGIE
CCCCCCCCCCEECCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQQQGVLETGDLEEALNAAQAIGD
HHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCH
DRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTG
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECC
QPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTG
CCCCHHHHHCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCC
CGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFAQGYVIAHEVGHHVQKLLGIE
CCCCCCCCCCEECCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQQQGVLETGDLEEALNAAQAIGD
HHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCH
DRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]