Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

Click here to switch to the map view.

The map label for this gene is hyaE [H]

Identifier: 82544701

GI number: 82544701

Start: 2243563

End: 2243961

Strand: Reverse

Name: hyaE [H]

Synonym: SBO_2255

Alternate gene names: 82544701

Gene position: 2243961-2243563 (Counterclockwise)

Preceding gene: 82544702

Following gene: 82544700

Centisome position: 49.65

GC content: 56.39

Gene sequence:

>399_bases
ATGAGCAACGACACGCCATTTGATGCGTTGTGGCAACGAATGCTGGCGCGCGGCTGGACGCCGGTCAGTGAATCCCGTCT
TGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCACGCCAGAGGTCAGCGATA
ATCCGGTAATGATTGGCGAATTACTGCACGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCTTGAGCAGAGC
GAAGCCATCGGCGATCGCTTTGGCGTCTTTCGCTTTCCTACCACTTTAGTGTTTACCGGCGGAAACTATCGCGGCGTGCT
GAATGGTATTCACCCGTGGGCGGAACTGATAAACCTGATGCGCGGGCTTGTCGAACCGCAGCAGGAGCGTGCCTCATGA

Upstream 100 bases:

>100_bases
TGGCTAATGAATCGCGTTGTCTCAATTATGACTGTCTGTCGATGGAAAATTACGAAGGCGTTCGCTTGCGCCAGTACCGG
ATGACACAGGAGGAGCAGGG

Downstream 100 bases:

>100_bases
GCGAAATTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGAACGATGACAGTTTCAGCATGAATCCACTGCCGATCACC
TGTCAGGTGAATGATGAACC

Product: hydrogenase-1 operon protein HyaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQS
EAIGDRFGVFRFPTTLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQERAS

Sequences:

>Translated_132_residues
MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQS
EAIGDRFGVFRFPTTLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQERAS
>Mature_131_residues
SNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSE
AIGDRFGVFRFPTTLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQERAS

Specific function: Not known. Could form, along with hyaD, a complex involved in the processing of the hydrogenase 1 structural operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupG/hyaE family [H]

Homologues:

Organism=Escherichia coli, GI1787210, Length=132, Percent_Identity=98.4848484848485, Blast_Score=266, Evalue=3e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010893
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF07449 HyaE [H]

EC number: NA

Molecular weight: Translated: 14901; Mature: 14770

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGE
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH
LLHEFPDYTWQVAIADLEQSEAIGDRFGVFRFPTTLVFTGGNYRGVLNGIHPWAELINLM
HHHHCCCCEEEEEECCCHHHHHHHHHCCCEECCEEEEEECCCCCCHHCCCCHHHHHHHHH
RGLVEPQQERAS
HHHCCCHHHHCC
>Mature Secondary Structure 
SNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGE
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH
LLHEFPDYTWQVAIADLEQSEAIGDRFGVFRFPTTLVFTGGNYRGVLNGIHPWAELINLM
HHHHCCCCEEEEEECCCHHHHHHHHHCCCEECCEEEEEECCCCCCHHCCCCHHHHHHHHH
RGLVEPQQERAS
HHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2180913; 8905232; 9278503 [H]