| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82544501
Identifier: 82544501
GI number: 82544501
Start: 2003392
End: 2004078
Strand: Reverse
Name: 82544501
Synonym: SBO_2037
Alternate gene names: NA
Gene position: 2004078-2003392 (Counterclockwise)
Preceding gene: 82544502
Following gene: 82544500
Centisome position: 44.34
GC content: 43.52
Gene sequence:
>687_bases ATGAGCTTTATGGCTTTTGTAACTTGTTTGACAATTGCATTTATCGCCGGTTTTGCTGTTGCCAGAAAATTGACACTCCG AAAAGTTGCCTCATCGGTAATCATCGCTAAATCGCAACCCGTCCCTTCATCTGCAACTTCCCCTGCCGCTAAGGCGTCGA CAAGGAGCTATATACCGCAGAAAACCTATCGTGACTCTCGTTGGCAAGAGCGAGATGAGTTATTTCAGGGAATGGTTGCC GAAGGTATTTTATTGGAAAGAAAAGAGTGGTTAATCACTCGTTGTGAAAAAATGTATTTCGATAATCTGGAAAAATGGTT TGGACATTATTGTCATATCCATTGCCAGGTCTCTCTGGGGCGCTTGATCAACTTTCCAGAACAACCTGAGTTTAGCGAAG AAGAAAGAAAGCGTTTCTTTGCAATTTATAATGGCATGGCAATGGATTATGTTCTGGTTTCAAAGAAGAACAATAAAATA GTCTGTGTTATTGAGCTGGATGACCCGAGTCATGAAAGGGCGGATCGCATTATTCGTGACCGTTGGTTGGATACAATTAT GACTCTTGCACGGGTGCCTTTTGTACGAGCTTCTGTCACTAAATTGGAGGAAATTCCTCCGGTCTGGGAGACTCGTGGCA AAATTCGCCCATTAGTCGCGGCGACAAAGAGTGAACCGGTGCATTAA
Upstream 100 bases:
>100_bases ACTAACTATATATTGATCGTTGCATTGTTGGCATGTAACACGCTGCAGCGAGTAACATTGGTAATGAAATATAATCAACA TGGATAGGTGAAAATTAATT
Downstream 100 bases:
>100_bases CTAAGTATCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAGCCCGTACCTTCGTACGAGCTCT TCTTTAAAGATGGCGGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQKTYRDSRWQERDELFQGMVA EGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQVSLGRLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKI VCVIELDDPSHERADRIIRDRWLDTIMTLARVPFVRASVTKLEEIPPVWETRGKIRPLVAATKSEPVH
Sequences:
>Translated_228_residues MSFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQKTYRDSRWQERDELFQGMVA EGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQVSLGRLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKI VCVIELDDPSHERADRIIRDRWLDTIMTLARVPFVRASVTKLEEIPPVWETRGKIRPLVAATKSEPVH >Mature_227_residues SFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQKTYRDSRWQERDELFQGMVAE GILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQVSLGRLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKIV CVIELDDPSHERADRIIRDRWLDTIMTLARVPFVRASVTKLEEIPPVWETRGKIRPLVAATKSEPVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26345; Mature: 26214
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHCCCC KTYRDSRWQERDELFQGMVAEGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQVSLG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHH RLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKIVCVIELDDPSHERADRIIRD HHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHH RWLDTIMTLARVPFVRASVTKLEEIPPVWETRGKIRPLVAATKSEPVH HHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCCCCHHEEECCCCCCC >Mature Secondary Structure SFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHCCCC KTYRDSRWQERDELFQGMVAEGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQVSLG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHH RLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKIVCVIELDDPSHERADRIIRD HHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHH RWLDTIMTLARVPFVRASVTKLEEIPPVWETRGKIRPLVAATKSEPVH HHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCCCCHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA