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The map label for this gene is ycjI [H]

Identifier: 82544226

GI number: 82544226

Start: 1723427

End: 1724215

Strand: Direct

Name: ycjI [H]

Synonym: SBO_1744

Alternate gene names: 82544226

Gene position: 1723427-1724215 (Clockwise)

Preceding gene: 82544225

Following gene: 82544228

Centisome position: 38.13

GC content: 53.99

Gene sequence:

>789_bases
TTGATAATCCGCAAAATTTGCACAACACTGCCTGTAATACTTCCTGAACCAGAGACGATCATGACCGTAACCCGCCCACG
CGCCGAACGCGGCGCATTTCCGCCCGGAACAGAACATTACGGACGTTCATTATTGGGCGCGCCGTTAATCTGGTTTCCTG
CCCCTGCAGCCAGCCGCGAAAGTGGTTTGATTCTGGCTGGCACTCACGGTGATGAAAACTCTTCGGTCGTCACGCTCTCC
TGTGCTCTGCGGACGTTGACACCTTCTTTGCGCCGCCATCATGTGGTGCTGTGTGTGAATCCTGACGGCTGCCAGCTGGG
GTTACGGGCCAATGCTAATGGTGTGGATTTAAACAGAAACTTTCCGGCGGCGAACTGGAAGGAAGGTGAAACGGTTTATC
GCTGGAACAGCGCCGCTGAAGAACGTGATGTCGTATTACTGACAGGTGACAAACCTGGCTCAGAACCTGAAACCCAGGCG
CTGTGCCAGCTTATACACCGCATTCAACCTGCCTGGGTGGTCTCATTCCACGATCCACTGGCCTGTATTGAAGATCCCAG
ACACAGCGAATTAGGCGAATGGCTGGCCCAGGCGTTTGAATTGCCTCTGGTAACCAGCGTCGGTTATGAAACGCCTGGCT
CTTTCGGCAGTTGGTGTGCAGATCTCAACTTGCATTGCATCACCGCAGAGTTTCCGCCCATCTCCTCCGACGAAGCCAGC
GAAAAATATCTCTTTGCGATGGCAAACTTGCTGCGCTGGCATCCTAAAGATGCAATTCGCCCGTCGTGA

Upstream 100 bases:

>100_bases
AGTCAGCATAATTCTAATATCTGCACATCAATAAAAATGCAAACAACTTCCGGCAAAAAAAGTGATACAAGATCGATGAC
ATAGCGTTGAAGAAAAGGAT

Downstream 100 bases:

>100_bases
ACTGAAGCGCCGGTTCCACATCTACCGCCAGCCAGGTCGGTCCGTCAAGATCGGCGAAACTGACCTGCGGCACCAGCGGT
AAAGCGGCGCTAATGGCACG

Product: murein peptide amidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MIIRKICTTLPVILPEPETIMTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLILAGTHGDENSSVVTLS
CALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQA
LCQLIHRIQPAWVVSFHDPLACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDEAS
EKYLFAMANLLRWHPKDAIRPS

Sequences:

>Translated_262_residues
MIIRKICTTLPVILPEPETIMTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLILAGTHGDENSSVVTLS
CALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQA
LCQLIHRIQPAWVVSFHDPLACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDEAS
EKYLFAMANLLRWHPKDAIRPS
>Mature_262_residues
MIIRKICTTLPVILPEPETIMTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLILAGTHGDENSSVVTLS
CALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQA
LCQLIHRIQPAWVVSFHDPLACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDEAS
EKYLFAMANLLRWHPKDAIRPS

Specific function: Unknown

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510938, Length=242, Percent_Identity=100, Blast_Score=498, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834 [H]

Pfam domain/function: PF00246 Peptidase_M14 [H]

EC number: NA

Molecular weight: Translated: 28821; Mature: 28821

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRKICTTLPVILPEPETIMTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRE
CHHHHHHHHCCEEECCCCEEEEEECCCHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCCC
SGLILAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRN
CCEEEEECCCCCCCCEEEEEEHHHHHCHHHHHCEEEEEECCCCCEEEEEECCCCEECCCC
FPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPL
CCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCH
ACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDEAS
HHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCH
EKYLFAMANLLRWHPKDAIRPS
HHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIIRKICTTLPVILPEPETIMTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRE
CHHHHHHHHCCEEECCCCEEEEEECCCHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCCC
SGLILAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRN
CCEEEEECCCCCCCCEEEEEEHHHHHCHHHHHCEEEEEECCCCCEEEEEECCCCEECCCC
FPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPL
CCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCH
ACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDEAS
HHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCH
EKYLFAMANLLRWHPKDAIRPS
HHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]