Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82544225

Identifier: 82544225

GI number: 82544225

Start: 1722587

End: 1723177

Strand: Direct

Name: 82544225

Synonym: SBO_1743

Alternate gene names: NA

Gene position: 1722587-1723177 (Clockwise)

Preceding gene: 82544222

Following gene: 82544226

Centisome position: 38.11

GC content: 42.13

Gene sequence:

>591_bases
GTGATTAATCAACTGGCAGATAAACAAACCATTAAACAAACTTTATTTGCCCGTCAGCCAGCAAAAATCCACAAACCCTA
TCCAACTAATAGCAAGATTATTATGGGAGATGTACTGAATCATGCAGCACTGAAGCAGGCCATGCAGGGACAGGACGTTG
TGTATGCCAACCTTACGGGGGAAGATTTAGATATTCAGGCAAATTCAGTGATCGCTGCGATGAAAGCCTGTGATGTTAAA
CGTCTGATCTTTGTTCTTTCCCTCGGTATTTATGATGAAGTTCCAGGAAAATTTGGCGAATGGAATAATGCAGTTATTGG
TGAGCCCCTAAAACCATTCCGCAGGGCTGCGGATGCAATTGAGGCTTCTGGACTGGAATATACAATTCTTCGCCCTGCCT
GGCTGACTGATGAAGATATTATTGATTATGAGCTTACCTCACGCAATGAACCATTCAAAGGTACGATCGTATCACGTAAG
AGTGTCGCAGCATTAATCACAGATATCATCGATAAACCTGAGAAACACATTGGTGAGAATATAGGTATCAATCAACCCGT
GACTGATGGTGACAAGCCATTATTCATGTAA

Upstream 100 bases:

>100_bases
ACTCTTTAGAGTAACGTTGGTTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGT
TAAACTCAGGCTACCTCAAT

Downstream 100 bases:

>100_bases
ATCAATTACATAGTTACCATCGTAATGTACTATGTGCAGTACGATTTATTAAACTTATTAAGGTGAACTGATCAATCCGA
TGCGATTAACATGTGTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase; Saccharopine Dehydrogenase Related Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; NADH-Flavin Reductase; NmrA Family Protein; Saccharopine Dehydrogenase Or Related Protein; Saccharopine Dehydrogenase

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALKQAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVK
RLIFVLSLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRK
SVAALITDIIDKPEKHIGENIGINQPVTDGDKPLFM

Sequences:

>Translated_196_residues
MINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALKQAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVK
RLIFVLSLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRK
SVAALITDIIDKPEKHIGENIGINQPVTDGDKPLFM
>Mature_196_residues
MINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALKQAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVK
RLIFVLSLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRK
SVAALITDIIDKPEKHIGENIGINQPVTDGDKPLFM

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21718; Mature: 21718

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALKQAMQGQDVVYANLTG
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCC
EDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
EASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGEN
HHCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEECHHHHHHHHHHHHCCCHHHCCCC
IGINQPVTDGDKPLFM
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALKQAMQGQDVVYANLTG
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCC
EDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
EASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGEN
HHCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEECHHHHHHHHHHHHCCCHHHCCCC
IGINQPVTDGDKPLFM
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA