Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is 82543892

Identifier: 82543892

GI number: 82543892

Start: 1367121

End: 1367363

Strand: Direct

Name: 82543892

Synonym: SBO_1388

Alternate gene names: NA

Gene position: 1367121-1367363 (Clockwise)

Preceding gene: 82543891

Following gene: 82543893

Centisome position: 30.25

GC content: 53.09

Gene sequence:

>243_bases
GTGGAGATCACCGGGGCTATTGAGCAGGCTGGATCCCTGCGTGGTCTGTCGCTGTCTGATGTGCTGAATCTGAAAGCGGA
TACCATGTTCACGCTGTTGCCTCGCGTGACCTCGCCACGACTGGATGAAGTGATGATTAAAAAAATGTCGTCACGCGATT
TTATTCAGTTGTGCGCTGTGGCTGTAAATTTTATGAGCGAGCCAGACTCTGGCGCGAAGAGCGTGCAGGAGACGGCAGCG
TAA

Upstream 100 bases:

>100_bases
CACCGTGGCGGATAATGTGACGGCAGTTGAGGATATGGCTGTCGAACGTGGCGTAAAACTGACCCGACCAATTGAGCGTG
GTGCCGAAAAAATCACGTAT

Downstream 100 bases:

>100_bases
TCACCCTGGTGTGCTTTGAGCACATCGAAGATCTGGTGGCGGATATTGCCGCCATTTTTAACTGGTCGCCCGCCGAAATC
TTCATGATGACGCCCGGCGA

Product: tail protein

Products: NA

Alternate protein names: Phage Tail Protein

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAVAVNFMSEPDSGAKSVQETAA

Sequences:

>Translated_80_residues
MEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAVAVNFMSEPDSGAKSVQETAA
>Mature_80_residues
MEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAVAVNFMSEPDSGAKSVQETAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8633; Mature: 8633

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAV
CCCCCCHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH
AVNFMSEPDSGAKSVQETAA
HHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLCAV
CCCCCCHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH
AVNFMSEPDSGAKSVQETAA
HHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA